Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4590g00001 ATGAACGACCTGTTCTCCAGCTCGTTCTCCCGTTTCCGCGGCGACCAGGACTCGCCGGACCACCACCACGTGATCGAGATGTCCGGCGGAGGACGCGGCGGCGGAGAGGTGAACCTGGACAAGTTCTTCGAGGACGTGGAGGGCGTGAAGGAGGAGCTAAAGGAGCTGGAGGGATTGGCGCAGAGTCTGAGGAGCTGCCACGAGCAGAGCAAGACGCTGCACAACGCCAAGGCCGTGAGGGACCTTCGTTCGCGCATGGACGGCGACGTTTCGGTGGCGCTCAAGAAGGCCAAGCTCATCAAGCTGAAACTCGAGGCTCTGGAGCGGTCCAACGCCGCCAACCGAAACCTACCAGGCTGCGGGCCCGGTTCCTCCTCGGACCGGACCCGAACCTCCGTGGTCAACGGCTTGAAGAAGAAGCTCAAGGACTCCATGGACAACTTCAACGATATTCGCCAGCTCGTCTCGTCGGAGTACCGCGAGACCGTGCAGCGACGGTACTTCACCGTCACCGGTGAGAATCCCGACGATAAGACCCTCGATCTCTTGATCTCCACCGGTGAAAGTGAGACCTTCCTTCAGAAAGCCATTCAAGAGCAAGGCAGGGGTAGAATTCTGGACACCATCAATGAGATTCAAGAGAGGCATGATGCTGTCAAAGAGTTGGAGAAGAATCTCAAGGAGTTGCACCAAGTGTTCCTTGACATGACAGTGTTGGTGCAACATCAAGGTGAGCAATTGGATGATATTGAGAGCCATGTGGCAAGAGCTCATTCCTTTGTGCGCACTGGAGCTGAGCAGTTGCAGACTGCACGGAAGCACCAGAAAAACACCAGGAAATGGACCTGTTATTGTATCATACTTCTTCTGGTGATCATCTTGTTTGTGGTGCTCTTCACCGTGAAGCCGTGGAACCATAACAGTAGTGGCAGTAGTCAGCCTCCACCGCCTCAAACACCGCCACCTCCTATTGAGCTTTATATTTTTGGATCTAGCAAGGTCTGTACCGGTCGGCAACCAGCACGGAACCAGCACGGTCGGCCGGTCGGAAGAGAAATTAAGCTTACGTCCTATGGACAAAGCTTGAGGGGCTATGTACCGGTCGGAACCATCACGGTCGGCCGGTCTTCCGTACCACAGGACAGGTGA 1149 0.5561 MNDLFSSSFSRFRGDQDSPDHHHVIEMSGGGRGGGEVNLDKFFEDVEGVKEELKELEGLAQSLRSCHEQSKTLHNAKAVRDLRSRMDGDVSVALKKAKLIKLKLEALERSNAANRNLPGCGPGSSSDRTRTSVVNGLKKKLKDSMDNFNDIRQLVSSEYRETVQRRYFTVTGENPDDKTLDLLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKELEKNLKELHQVFLDMTVLVQHQGEQLDDIESHVARAHSFVRTGAEQLQTARKHQKNTRKWTCYCIILLLVIILFVVLFTVKPWNHNSSGSSQPPPPQTPPPPIELYIFGSSKVCTGRQPARNQHGRPVGREIKLTSYGQSLRGYVPVGTITVGRSSVPQDR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4590g00001 382 CDD SynN 39 196 IPR006011 GO:0016020
Mupr4590g00001 382 SUPERFAMILY t-snare proteins 37 264 IPR010989 GO:0016020|GO:0016192
Mupr4590g00001 382 MobiDBLite consensus disorder prediction 1 32 - -
Mupr4590g00001 382 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 36 166 - -
Mupr4590g00001 382 PANTHER SYNTAXIN 65 292 IPR045242 -
Mupr4590g00001 382 Coils Coil 39 66 - -
Mupr4590g00001 382 SMART tSNARE_6 204 271 IPR000727 -
Mupr4590g00001 382 FunFam Syntaxin 132 202 302 - -
Mupr4590g00001 382 SMART SynN_4 34 160 IPR006011 GO:0016020
Mupr4590g00001 382 Gene3D - 36 169 - -
Mupr4590g00001 382 Pfam Syntaxin 41 244 IPR006011 GO:0016020
Mupr4590g00001 382 Coils Coil 209 232 - -
Mupr4590g00001 382 CDD SNARE_syntaxin1-like 208 270 - -
Mupr4590g00001 382 Pfam SNARE domain 245 297 IPR000727 -
Mupr4590g00001 382 ProSitePatterns Syntaxin / epimorphin family signature. 215 254 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mupr4590g00001 382 Gene3D - 205 302 - -
Mupr4590g00001 382 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 209 271 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4590g00001 Mupr-Chr4590 1273 4757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4590g00001 30 323 SNARE and Associated Proteins AT3G11820 74.754 3.55e-156 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4590g00001 K08486 - gmx:100789318 523.472