Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4575g00001 ATGGCAAATGGGAAAGGGATCCATATAAACATGATTACACCAAACTTGAACCTGGAACCTGAAGATGGTTTAGATGTCTGCAGGAAAGTAGTAGGTTCCAACATGTCATTACAAGAAACATCACATGATCTTACCAAGGACAGCACCACCAGTTCCTCCTCTCTCACAAAGGCTGATCCTGATCCAGGTTTTGTTTCCCTTGACTTGACCCTCAACCTCAATCCTAGTGATGAAGAGTTGAAAGGCACAAGTGATACCAGCAGTGAAGTGGGAGCTGAAACTCAAACTCATGCTTCAGCATCACCAATTCCTAGAGTTTTCTCTTGTAATTATTGTCAGCGCAAATTCTTTAGCTCGCAGGCGTTGGGAGGTCATCAGAATGCTCACAAAAGGGAGAGGACAATGGCAAAGCGCGCAATGCGAATGGGGATGTTCACTCAAAGGTACTCAAGCCTAGCATATCTGCCTCTCCATGGTTCCACTCTTCGGTCTCTTGGAATTGAAGCTCACGCCGCGATGCACCAAGGACATGTGCATTCACTGAGAGCTCCTGAGGTGAGAGCAGCAGCAAAATTTGAGAAAGACTATTTTAGGACGCCGATCTTTGTGGAAGATGATGATGTTGGTCTATTTTGGCCTGGCAGTTTCAGACAGATAGATGAAAGGGGTGGTAGTGTTAATTTTAGGCATGATGAGCATGCTCACAATTCAACTGCTAGTTTTGTAGCAACTGCACCTCCAGCCCAAGCATCTGCATTCCCTGATCTTACTCTGAGGCTTTGA 783 0.4559 MANGKGIHINMITPNLNLEPEDGLDVCRKVVGSNMSLQETSHDLTKDSTTSSSSLTKADPDPGFVSLDLTLNLNPSDEELKGTSDTSSEVGAETQTHASASPIPRVFSCNYCQRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTQRYSSLAYLPLHGSTLRSLGIEAHAAMHQGHVHSLRAPEVRAAAKFEKDYFRTPIFVEDDDVGLFWPGSFRQIDERGGSVNFRHDEHAHNSTASFVATAPPAQASAFPDLTLRL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4575g00001 260 MobiDBLite consensus disorder prediction 38 61 - -
Mupr4575g00001 260 ProSitePatterns Zinc finger C2H2 type domain signature. 109 129 IPR013087 -
Mupr4575g00001 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 134 IPR013087 -
Mupr4575g00001 260 SUPERFAMILY beta-beta-alpha zinc fingers 105 135 IPR036236 -
Mupr4575g00001 260 FunFam Zinc finger protein 2 83 153 - -
Mupr4575g00001 260 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 46 181 IPR044246 GO:0009788
Mupr4575g00001 260 MobiDBLite consensus disorder prediction 75 99 - -
Mupr4575g00001 260 MobiDBLite consensus disorder prediction 38 59 - -
Mupr4575g00001 260 Gene3D Classic Zinc Finger 83 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4575g00001 Mupr-Chr4575 648 4406 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4575g00001 105 260 C2H2 Transcription Factor Family AT1G66140 46.111 3.28e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4575g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4575g00001 - - gmx:100777133 373.244