Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4567g00002 ATGGTGAAGCCGGTCGTGGAAAAACCTGCGGCGGAGCGAAGCAATACATCGTACCGAGGAGTACGGAAGAGGAAGTGGGGAAAGTATGTGTCCGAAATTAGGCTACCCAACAGCCGCCAGAGGATTTGGTTGGGATCCTACGACAGCGCCGAGAAGGCGGCGCGTGCATTCGACGCGGCCATGTTCTGCTTACGTGGCAGCGGTGCCAAGTTTAATTTTCCCAACGACCCGCCGGAGATCGACGGCGGGAGGTCCATGACCCCCTCTCAGATTCAGATCGCCGCCGCGCGTTTCGCCAATTCGGAGCCCCGGAAGGAGTGTTCGGGTCACCGTGTGGAGTCTTCATCTTCGGATGAGGAAACGACATCGGTGCCTGAGTCGTCGTCTCCTCCTCTCTCCGACGTGACGGTCCAAAACGACGCCGAATTTCTAAGCGGGTCGTTTCCGGATCTTTTCTCGGATCTTGGTTCGGGTAATTTTGGACCCGATTTCTCCGTTTTCCCGGGTTTCGACGATTTTAGCACCGATTACTTGTTTCCGGAGCTTCCGAGCTTCGATTACGGAGAAGAGAACATGGATGGGTTAATAATTCAGGACTCGTTCTTGTGGAATTTCTAA 618 0.5469 MVKPVVEKPAAERSNTSYRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAARAFDAAMFCLRGSGAKFNFPNDPPEIDGGRSMTPSQIQIAAARFANSEPRKECSGHRVESSSSDEETTSVPESSSPPLSDVTVQNDAEFLSGSFPDLFSDLGSGNFGPDFSVFPGFDDFSTDYLFPELPSFDYGEENMDGLIIQDSFLWNF 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4567g00002 205 CDD AP2 18 76 IPR001471 GO:0003700|GO:0006355
Mupr4567g00002 205 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Mupr4567g00002 205 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Mupr4567g00002 205 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Mupr4567g00002 205 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Mupr4567g00002 205 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 138 - -
Mupr4567g00002 205 MobiDBLite consensus disorder prediction 103 117 - -
Mupr4567g00002 205 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Mupr4567g00002 205 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Mupr4567g00002 205 MobiDBLite consensus disorder prediction 118 135 - -
Mupr4567g00002 205 FunFam Ethylene-responsive transcription factor 2 16 75 - -
Mupr4567g00002 205 Gene3D AP2/ERF domain 17 75 IPR036955 GO:0003700|GO:0006355
Mupr4567g00002 205 MobiDBLite consensus disorder prediction 100 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4567g00002 Mupr-Chr4567 7655 8272 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4567g00002 16 205 AP2-EREBP Transcription Factor Family AT1G19210 51.256 5.26e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr4567g00002 AP2 2.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4567g00002 - - gmx:100802508 305.064