Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4562g00001 ATGGGTTGGATTCCCTGTTCTGGAAGTTCAAACACTAAGAAGAAGTTAAAGAAGAAATTGGAGAAGCTAGAAGCGCAGGACAGCCTCGTTGATCCGATCAAAGCCACCCCAGGGAATTTGAAGAGGAATTCATCCATGAATTCCAAAGACTCCTCTAAAAATGGAAACCCTGATCACATTGCTGCACAGACATTTTCATTCCGTGAGTTGGCAACTGCAACTAGAAACTTCAGAGCTGAATGTCTCCTGGGTGAGGGAGGCTTTGGAAGAGTATACAAGGGGCGTTTGGAAAATATTAATCAGATTGTTGCAATTAAACAACTTGACCGAAATGGGCTACAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTTCTTCATCACCCTAACCTTGTGAACCTGATTGGTTATTGTGCTGATGGGGATCAAAGGCTTCTAGTTTATGAATATATGTCTTTAGGATCCTTGGAAGACCACTTGCACGATATTTCTCCTGGCAAGAAACGACTTGACTGGAACACACGGATGAAAATAGCTGCTGGGGCAGCAAAGGGATTGGAATATCTACATGACAAAGCTAATCCTCCTGTAATATACCGAGATTTAAAGTGCTCCAACATTTTGCTTGGGGAAGGATATCATCCAAAGTTATCTGATTTTGGTCTGGCTAAACTTGGCCCAGTGGGGGAAAACACCCATGTATCAACAAGGGTTATGGGCACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGTGTTGTTCTTTTGGAAATAATTACTGGAAGGAAAGCAATTGACAATTCAAAATCTGCACAAGAGCAGAATCTTGTTGCATGGGCCAGACCCTTGTTCAAAGATCAACGAAAATTTTCGCAAATGGCTGATCCAATGCTCCAAGGTCAATATCCTCCAAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCACGAGCAGGCCAATATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGAGTTACCTTGCTTTACAAAAATATGACCCCAATACACAGACAGTACAAAGCTCTCGCCTTGCCCCTGGTACTCCTCCGAGAACCAAGAGGGGACATCTGGTGCAAATTTCAAACATCTTACAACACACTGCAAGATATAGATTTGTAGATGTTAATACTCTTATGGTGGTGTTCTTTCTTCAGAGCTTAGTTGCTAAAAATGTTCGTTTAGAAGTTAACAAAAGGATATCGGACACGGCAAGACCGTAG 1302 0.424 MGWIPCSGSSNTKKKLKKKLEKLEAQDSLVDPIKATPGNLKRNSSMNSKDSSKNGNPDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLENINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLHDISPGKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAQEQNLVAWARPLFKDQRKFSQMADPMLQGQYPPRGLYQALAVAAMCVHEQANMRPVIADVVTALSYLALQKYDPNTQTVQSSRLAPGTPPRTKRGHLVQISNILQHTARYRFVDVNTLMVVFFLQSLVAKNVRLEVNKRISDTARP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4562g00001 433 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Mupr4562g00001 433 Gene3D Phosphorylase Kinase; domain 1 47 153 - -
Mupr4562g00001 433 CDD STKc_IRAK 83 351 - -
Mupr4562g00001 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Mupr4562g00001 433 SUPERFAMILY Protein kinase-like (PK-like) 63 370 IPR011009 -
Mupr4562g00001 433 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Mupr4562g00001 433 Coils Coil 6 26 - -
Mupr4562g00001 433 Gene3D Transferase(Phosphotransferase) domain 1 154 371 - -
Mupr4562g00001 433 Pfam Protein tyrosine and serine/threonine kinase 81 349 IPR001245 GO:0004672|GO:0006468
Mupr4562g00001 433 PANTHER OS07G0668900 PROTEIN 21 364 - -
Mupr4562g00001 433 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4562g00001 433 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
Mupr4562g00001 433 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4562g00001 433 MobiDBLite consensus disorder prediction 28 58 - -
Mupr4562g00001 433 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4562g00001 Mupr-Chr4562 2943 6937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4562g00001 31 355 Glycoside Hydrolase AT3G07070 68.308 1.07e-165 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mupr4562g00001 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4562g00001 - - gmx:100499648 734.176