Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4560g00001 ATGGGTTTTCCGGTGGGTTACGCGGAGGTGTTCTTCCCGAATCCGTTCCTGCACACGCTGGCCCTCCTCGGCCTCCTCCGAAACCTCGTATTCTTCCTCTTCCACTTCCTCGGCCTCTCCGACTTCCTCGAAACCGAGGTGGCGTGGCCAGAGCCTCGACCATCCGACGCGGCGCGTCCCCCCTCCGCGTCGGCGCTGCTGATCCGAGACCTGCTGCCGGTGGCCAGGTTCGGCGACTCCGGCGCCACCGGGGAGAGCGGCTGCGCCTGCGCGGTGTGTCTGTTCGAGTTCTCCGAGGAGGAGGAGATTCGGTGCATGCGCAACTGCAAGCACATTTTCCACAGGAGCTGCGTGGACCGTTGGATCGATCACGATCAGAAAACGTGCCCTCTCTGTAGGACTCCCTTTGTGCCCGATGATATGCTCGATGACTATAATCAACGCCTCTGGGCTGCTTCTGGGGTCACCGAGTTTTACGCTGATTACACTTCTTCCTTCTGA 501 0.6088 MGFPVGYAEVFFPNPFLHTLALLGLLRNLVFFLFHFLGLSDFLETEVAWPEPRPSDAARPPSASALLIRDLLPVARFGDSGATGESGCACAVCLFEFSEEEEIRCMRNCKHIFHRSCVDRWIDHDQKTCPLCRTPFVPDDMLDDYNQRLWAASGVTEFYADYTSSF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4560g00001 166 PANTHER RING ZINC FINGER PROTEIN-RELATED 24 152 - -
Mupr4560g00001 166 SMART ring_2 90 132 IPR001841 -
Mupr4560g00001 166 SUPERFAMILY RING/U-box 89 140 - -
Mupr4560g00001 166 ProSiteProfiles Zinc finger RING-type profile. 90 133 IPR001841 -
Mupr4560g00001 166 Pfam Ring finger domain 89 133 IPR001841 -
Mupr4560g00001 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 138 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4560g00001 Mupr-Chr4560 11735 12235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4560g00001 1 165 C3H Transcription Factor Family AT1G63840 47.647 9.72e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4560g00001 K16281 - gmx:100790975 290.812