Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4559g00002 ATGGCGGGGTTGTTCTCATTAGGCGGAGGGCGAGGAAGCAGCAACCAGGACGAAGACAACAACAACCAAGGCAGCGAGATTCCCCCAGCGGAGACGCTATTCTGGTACAGCAAAAACGACGACGTTTCGTCCTATCGAGGGTTTGAGCTATGGAACCAGCAGGAGCAGCATCACCAGCACGTGATGCCCCAGCATGCGCGTCCCCTATTCCAGAGAGATCTTTACTCGACGGGCGTGGGGCCCAGCAGAGGCGTGTCCGATGATCAGTCGTCGTCGAGATCGGCGTTCGTGGCGATGCGCGCGGCGGCTGCGGCGGAGGGAGGAATAAGCTGCCAGGACTGCGGGAACCAAGCGAAGAAAGATTGCCCTCACATGCGGTGCAGAACGTGCTGCAAGAGCCGCGGCTACGAGTGCCAAACCCACCTAAAAAGCACCTGGGTTCCCGCTTCCAAACGTCGCGAGCGCCAGCAACAGCTCGCGGCGTTGCAGGAGCAGCAACAGCAGAGAGACATTTCCAAACGCCCAAGAGACCCAACTGCTTGCACTCATTTGCCCTCGTCAGGGTTAGAGCAAGGGCATTTTCCTGCTGTGGTGAGCTCTCCGGCGGAGTTCAGGTGCGTGAGGGTTAGCTGTGTGGAGGATGCTGATGACAGGTACGCATATCAAACGGCTGTGAGCATTGGAGGACATGTGTTCAAAGGAATCCTCTATGACTATGGTCCCGAGAGTAGCAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTACATGGCTGGGGAAACTTCTGCGGGTGTTTCTGGAAATCATCCCTTGAACTTCACTGCTTCTGGCGTTGTCTCTTCTTCTGCTGCACTTGTTGATCCTTCTTCCTTGTATCCGGCTCCCGTTAACACTTTCATGGCTGGTAGTGGTACGCAATTCTTCCCTCACACAAGATCTTGA 954 0.5335 MAGLFSLGGGRGSSNQDEDNNNQGSEIPPAETLFWYSKNDDVSSYRGFELWNQQEQHHQHVMPQHARPLFQRDLYSTGVGPSRGVSDDQSSSRSAFVAMRAAAAAEGGISCQDCGNQAKKDCPHMRCRTCCKSRGYECQTHLKSTWVPASKRRERQQQLAALQEQQQQRDISKRPRDPTACTHLPSSGLEQGHFPAVVSSPAEFRCVRVSCVEDADDRYAYQTAVSIGGHVFKGILYDYGPESSNNNNNNNNNNNNNNNYMAGETSAGVSGNHPLNFTASGVVSSSAALVDPSSLYPAPVNTFMAGSGTQFFPHTRS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4559g00002 317 MobiDBLite consensus disorder prediction 149 187 - -
Mupr4559g00002 317 MobiDBLite consensus disorder prediction 1 31 - -
Mupr4559g00002 317 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 301 IPR007818 GO:0003700|GO:0006355
Mupr4559g00002 317 MobiDBLite consensus disorder prediction 9 28 - -
Mupr4559g00002 317 NCBIfam LRP1 C-terminal domain 193 241 IPR006511 -
Mupr4559g00002 317 NCBIfam putative zinc finger domain, LRP1 type 110 152 IPR006510 -
Mupr4559g00002 317 Pfam Domain of unknown function (DUF702) 108 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4559g00002 Mupr-Chr4559 19246 20846 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4559g00002 1 317 C2H2 Transcription Factor Family AT3G51060 43.316 4.21e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mupr4559g00002 DUF702 3.4e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4559g00002 - - gmx:100789129 442.965