Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4558g00008 ATGGAGGAACACTCTGCATCTGCATCTGCATCTGCATCTGCAATTGAGAAGAGAGAGGAGTTTGGCAAGTTGCAGTACGGATGCGAGCACTATAAGAGACGATGCAAAATTCTAGCACCATGCTGCAATCAGATATTTCCGTGTCGTCACTGCCACAACGACGCCGTGAACTCATCTAGCAACCCTGCGGATCATCATGAACTTGTTAGACGCGATGTTAAGCAAGTTATATGTTCTGTCTGTGATACTGAACAGGAGGTTGCCAAGGTGTGTTCTAACTGTGGCGTCAACATGGGAGAATATTATTGCGAGATATGCAAATTCTATGATGATGATACGGATAAAGGACAATTCCATTGTGATGAATGTGGCATTTGCAGGGTTGGTGGTCGAGATAAGTTCTTTCACTGTAAGAAATGTGGCTCTTGCTACTCAGTGAGCTTGCAAAACAATCACTCATGTGTAGAAAACTCAATGAAGGGTTCCTGTCCTGTCTGTTTTGAGCGTCATTTTGAAGTGCGGACACGCAATGCATATGGAATGCTATCAAGTGATGACAACTCAAAATCAGTTAACTTCTTAATAATTTCTGATGAGCTAAATGATTGTGCTCAATTAATAATTTGGGCTTTGTATCGCTGTCCTATCTGCTTGAAGACAATAGTCGATATGTCTTGGGAACATTTAGATCAGGAGATTGAAGCCGTTGCTATGCCTGAGGAGTACAGGTTTGAGGAGGGGAGAAGGGTTTCAATTCTATGCAATGATTGCAATTCTACCAACACGGTTTCTTTTCACATATTTGGTCACAAGTGCCGACACTGCAGATCGTATAACACCCGTAGGATTTCGACACCTGAACATCAGTAA 870 0.4253 MEEHSASASASASAIEKREEFGKLQYGCEHYKRRCKILAPCCNQIFPCRHCHNDAVNSSSNPADHHELVRRDVKQVICSVCDTEQEVAKVCSNCGVNMGEYYCEICKFYDDDTDKGQFHCDECGICRVGGRDKFFHCKKCGSCYSVSLQNNHSCVENSMKGSCPVCFERHFEVRTRNAYGMLSSDDNSKSVNFLIISDELNDCAQLIIWALYRCPICLKTIVDMSWEHLDQEIEAVAMPEEYRFEEGRRVSILCNDCNSTNTVSFHIFGHKCRHCRSYNTRRISTPEHQ 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4558g00008 289 SUPERFAMILY CHY zinc finger-like 24 97 IPR037274 GO:0008270
Mupr4558g00008 289 Pfam CHY zinc finger 28 108 IPR008913 GO:0008270
Mupr4558g00008 289 SUPERFAMILY Zinc hairpin stack 99 156 IPR037275 -
Mupr4558g00008 289 ProSiteProfiles Zinc finger CTCHY-type profile. 98 162 IPR017921 -
Mupr4558g00008 289 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 11 288 - -
Mupr4558g00008 289 Gene3D - 248 288 - -
Mupr4558g00008 289 ProSiteProfiles Zinc finger CHY-type profile. 21 96 IPR008913 GO:0008270
Mupr4558g00008 289 Pfam Zinc-ribbon 224 281 IPR039512 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4558g00008 Mupr-Chr4558 65781 69443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4558g00008 26 285 C2H2 Transcription Factor Family AT3G18290 37.918 1.31e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4558g00008 K10144 - gmx:100818374 436.802