Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4558g00007 ATGAACAGCGAAGAGTCACAAAATTCGCGACCCTGCGACTACTGTGGCCATTCCACAGCTCTTCTGTACTGCAGAGCCGATTCAGCAAAGTTGTGTTTCTCGTGCGATCGAGAGGTTCACTCCACCAACCAGCTATTTTCCAAGCACACTCGTACCCTGCTCTGCGACGCATGCGATGATTCCCCTGCCACCATACTCTGTTCCACCGATACCTCTGTTTTCTGCCAGAACTGTGACTGGGAGAAGCACAACCCTTCCCTCTCTTCCCTCCACCAGAGGAGACCCCTCGAAGGCTTCTCCGGCTGCCCTTCTGTCTCCGAACTCTTCTCCATCCTTGGCTTTCCAGATGTCACCAAAAAAACTCTGCTTTCTTCGCCTCAGGGAAGTGCCCCCTATGGCTTCTTAGGCTCCGAAATTGAAGGCCTTTCCGATTTGTTTGTGTGGGATTCTCCTTCTGTTGTCACTCTTGATGATTTGATTTCTTCTTCGGCTTCTTCTCATAGCTTTCAGGCCATGGAGGTTCCTCCTCTGCCCAAGAATCGGAAGGCTGCTTGTGGGCGACACAAAGAAGAGATTCTTAGTCAGCTTCGGGAATTGGCCAAGTCTGAGCCATTGGACCTTGAACAGTATGTGCAATCGGAGAACTTGTCCTCGGGTTTTGAACACGATGTGAAGACTGATATCTTTCCTTCTCGTGAGGTAAAGCTTCTCCATCTCTTTTTTTGTAGTTGTGTTTTCTTATCAATGCTGGTGCTGGTGCCTATTGATGGGTTCTTTTGGCATAGAGAAAGCAGTGAGCATATGTATCAAGTTGTTCCACTTCCTCCTGACTCGTCATTGAGAACTTATACTGAAGAAATTCCAGTTAAACATTCTACTTCTGCTGCTGCGGAAACTTGCACCTATGGCGACAATGGAGGGAAACCATCCATTTCTCTCAAGTCTGAAACCCTATCAACTACTCCCAAAGCTGTGGCATGTGAGTTAACGAGCCAAGAAAGAGATTCTGCATTATTACGGTACAAGCAGAAGAAGAAAACAAGAAGATATGACAAGCACATAAGGTATGAATCACGAAAAGTTCGGGCAGAAAGCAGGGTAAGAGTCAAGGGTCGATTTGCCAAGAGGGAACAGGAACACTGA 1143 0.4742 MNSEESQNSRPCDYCGHSTALLYCRADSAKLCFSCDREVHSTNQLFSKHTRTLLCDACDDSPATILCSTDTSVFCQNCDWEKHNPSLSSLHQRRPLEGFSGCPSVSELFSILGFPDVTKKTLLSSPQGSAPYGFLGSEIEGLSDLFVWDSPSVVTLDDLISSSASSHSFQAMEVPPLPKNRKAACGRHKEEILSQLRELAKSEPLDLEQYVQSENLSSGFEHDVKTDIFPSREVKLLHLFFCSCVFLSMLVLVPIDGFFWHRESSEHMYQVVPLPPDSSLRTYTEEIPVKHSTSAAAETCTYGDNGGKPSISLKSETLSTTPKAVACELTSQERDSALLRYKQKKKTRRYDKHIRYESRKVRAESRVRVKGRFAKREQEH 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4558g00007 380 ProSiteProfiles Zinc finger B-box type profile. 7 54 IPR000315 GO:0008270
Mupr4558g00007 380 CDD Bbox1_BBX-like 11 54 - -
Mupr4558g00007 380 Pfam B-box zinc finger 54 96 IPR000315 GO:0008270
Mupr4558g00007 380 Pfam B-box zinc finger 8 52 IPR000315 GO:0008270
Mupr4558g00007 380 ProSiteProfiles CCT domain profile. 334 376 IPR010402 GO:0005515
Mupr4558g00007 380 ProSiteProfiles Zinc finger B-box type profile. 50 96 IPR000315 GO:0008270
Mupr4558g00007 380 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 11 376 - -
Mupr4558g00007 380 CDD Bbox1_BBX-like 54 96 - -
Mupr4558g00007 380 Pfam CCT motif 334 376 IPR010402 GO:0005515
Mupr4558g00007 380 SMART bboxneu5 7 54 IPR000315 GO:0008270
Mupr4558g00007 380 SMART bboxneu5 55 96 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4558g00007 Mupr-Chr4558 57063 60103 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4558g00007 1 349 C2C2-CO-like Transcription Factor Family AT2G47890 38.333 5.64e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mupr4558g00007 CCT 6.4e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4558g00007 - - gmx:100817838 581.252