Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4557g00002 ATGGCGCCGAAGCAGAGAACTCGTAAGGTTAGCAGAAACCCCGAGTTGATAAGGGGAATCGGAAAGTATTCCAGATCCAAGATGTACCACAAAAGGGGCATCTGGGCTATTAAGGCCAAAAACGGTGGCGTTTTGCCAACCCACGACCCTAAACCTAAACCTGAAGCTCCTGCTCAGAAGCCTCCCAAATTTTACCCTGCTGATGATGTCAAGAAGCCCCTTGTCAACAAACATAAACCCAAACCCACTAAGCTAAGGGCTAGCATTGCTCCCGGGACAGTGTTGATTCTTCTTGCTGGTAGATTTAAGGGAAAGAGGGTTGTGTTTTTGAAGCAGCTTCCTTCTGGCTTGCTTCTTGTATCTGGTCCTTTCAAGATTAATGGAGTTCCTTTGAGACGTGTGAATCAGTCCTATGTTATAGGCACATCAACCAAAGTAGATGTCTCTGCCATTAATGTCGACAGTTTTGATGACAAATACTTTACAAAGGAAGCCCAGAAAAAGAAGAAGAAGGGAGAAGGCGAGTTCTTTGAGGCAGACAAGGAGGAAAAGAGTGTGTTGCCCCAGCAGAAGAAAGATGACCAGAAAACATTGGATGCGGCCTTGATAAAAGCCATCGAGAGTGTTCCAGACTTGAAGGCTTATCTGGGTGCCAGGTTTTCTCTGAAGGCTGGCGTCAAACCACATGAACTAAGTACGAATGAATGA 708 0.4576 MAPKQRTRKVSRNPELIRGIGKYSRSKMYHKRGIWAIKAKNGGVLPTHDPKPKPEAPAQKPPKFYPADDVKKPLVNKHKPKPTKLRASIAPGTVLILLAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDVSAINVDSFDDKYFTKEAQKKKKKGEGEFFEADKEEKSVLPQQKKDDQKTLDAALIKAIESVPDLKAYLGARFSLKAGVKPHELSTNE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4557g00002 235 Gene3D - 87 171 IPR014722 -
Mupr4557g00002 235 SUPERFAMILY Translation proteins SH3-like domain 87 173 IPR008991 -
Mupr4557g00002 235 Pfam Ribosomal protein L6, N-terminal domain 3 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Mupr4557g00002 235 FunFam 60S ribosomal protein L6 87 171 - -
Mupr4557g00002 235 PANTHER 60S RIBOSOMAL PROTEIN L6 3 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mupr4557g00002 235 MobiDBLite consensus disorder prediction 40 81 - -
Mupr4557g00002 235 Pfam Ribosomal protein L6e 126 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mupr4557g00002 235 CDD KOW_RPL6 81 231 IPR041997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4557g00002 Mupr-Chr4557 9544 11706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4557g00002 1 231 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 78.788 2.39e-118 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4557g00002 K02934 - gmx:100499766 406.371