Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4552g00003 ATGGGTGTCTCAGGGAAGTGGATTAAGGCATTGGTTGGTCGAAAGAAATCAGGAAAGCCAGAGTCATTAGAACAGGATGGAAATAAGGTTAGCAAGTTTCACCATCAGAAAAAGCATGCTGTCGAATTTGATGATGGTAAACTTCCAAATGAAATTGATAATGATGCTACTCGACCTATTGGAGATGACAATGGCCATACAAACATTGATGCCCATTATTCACCTTCTACTTCACAACAAGCCCTTGATACTGTACATAATCATCAAATGAGGGAGGAATGGGCTGCAATACGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCATTACGAGCTTTGAAAGGAGTGGTAAGGCTTCAGGCCCTTGTAAGAGGCTATGCAGTGAGAAAACAAGCTGCAATAACACTCCGATGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCATGTTCGCATGTCATTGGAAACTCAAGCAACACAACAGAAACTTAAGCAAAAGCCTGCAAACAAAGTTCAAGTTCAAGAAATAGAAGAACGATGGTGTGATAGTGTAGGATCTGTTCAAGAAATTCAGGCTAAAATATTGAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGGTCAAAACAGCAGCATGTTTCCTCTGGATTTGAACCAGATAAAAGTAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGACCTTGGGAGAATCGCTTTGTTGACATTAATCTTAGGGATGGAGTAACGGTACATGAAAATGGAGCTAAGGATGGTCAAAATGGAACAACACATCAGTTAAGGCCTGCTAACAAGCTATTTTCATCAGACACTCATCCGTACCCTGTTAGTCAGAGAACTGGTCCCATTCTTTCCAATGGCTGTGATTCTTCACCTACACCTAGCAAGTCAACAGGTTTGCTAGAATCATCAGACACACAACCTGTTAAGCCAAATTCTAAGGCAAATGTTGAAGAAGCTGACTCAAAACCTGGAATTGAGTCAAGATCTCATTCAAATCCAAAGGAGAGAGCATCACAGGCAGATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACAATGGGGGTGGTCCTGGATCTCATACAGCCAAACATCCTATTGGAACTAATGCGAAAGGGACGCTAAGCGCACAAAAACCCGGTAGGGATAAGCCTAAGCTCAATAGAGGAAAGGATGTGAATTTGCCAGCTATTCTTGAG 1281 0.4356 MGVSGKWIKALVGRKKSGKPESLEQDGNKVSKFHHQKKHAVEFDDGKLPNEIDNDATRPIGDDNGHTNIDAHYSPSTSQQALDTVHNHQMREEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGYAVRKQAAITLRCMQALVRVQARVRARHVRMSLETQATQQKLKQKPANKVQVQEIEERWCDSVGSVQEIQAKILKRQEAAAKRERAMAYALAHQWQAGSKQQHVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINLRDGVTVHENGAKDGQNGTTHQLRPANKLFSSDTHPYPVSQRTGPILSNGCDSSPTPSKSTGLLESSDTQPVKPNSKANVEEADSKPGIESRSHSNPKERASQADKQAKKRLSLPNNGGGPGSHTAKHPIGTNAKGTLSAQKPGRDKPKLNRGKDVNLPAILE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4552g00003 427 SMART iq_5 114 135 IPR000048 GO:0005515
Mupr4552g00003 427 SMART iq_5 91 113 IPR000048 GO:0005515
Mupr4552g00003 427 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Mupr4552g00003 427 Pfam IQ calmodulin-binding motif 116 133 IPR000048 GO:0005515
Mupr4552g00003 427 PANTHER IQ-DOMAIN 5-RELATED 1 386 - -
Mupr4552g00003 427 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Mupr4552g00003 427 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Mupr4552g00003 427 MobiDBLite consensus disorder prediction 343 371 - -
Mupr4552g00003 427 MobiDBLite consensus disorder prediction 46 60 - -
Mupr4552g00003 427 MobiDBLite consensus disorder prediction 46 82 - -
Mupr4552g00003 427 Gene3D - 93 134 - -
Mupr4552g00003 427 MobiDBLite consensus disorder prediction 292 340 - -
Mupr4552g00003 427 FunFam IQ-domain 11 91 142 - -
Mupr4552g00003 427 MobiDBLite consensus disorder prediction 14 34 - -
Mupr4552g00003 427 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Mupr4552g00003 427 MobiDBLite consensus disorder prediction 292 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4552g00003 Mupr-Chr4552 19196 23860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4552g00003 1 391 IQD Protein Family AT3G22190 53.904 1.93e-115 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4552g00003 - - gmx:100787148 699.893