LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4552g00002	ATGGGCGGTGGAGGACCACTCGTGGATGGCATTCGTCGCTTGTTTCATCGTTGCAAGACTATTAACTATTATCATCATCATCACCATCACCACCATCATCACGAGAAAAACAACAATAACAATGCCAACAACAACGACTACAATAACAACAACGTTAACGACATTGTCCTCGTGAGAGATTTGCGTACTCAAGAAACCTCTTCCCTCAACCTTCTCAAAGTGCCTGCACGCTCCCACATCAAACCTTCTTCCATGGATCGTAACAAAAAGGGTACACCGGAGGTAGAGTTTTTTACAGAGTATGGAGAGGCAAATAGGTATGAGGTCCAAGAAGTGATTGGAAAAGGGAGTTATGGTGTTGTGTGTTCTGCTCTTGACGCTCACACAGGCGAAAAAGTTGCAATTAAGAAAATCAACGATGTTTTTGAGCATGTGTCGGATGCAACACGGATCCTAAGAGAAATCAAACTCCTTCGTTTGCTCCGACATCCTGACATAGTTGAAATTAAGCATATAATGTTTCCTCCCTCGCGTCGAGAGTTCAAGGATGTTTATGTTGTGTTTGAGTTGATGGAGTCTGATCTTCATCAAGTAATCAAGGCAAATGATGATCTTACCCCTGAGCACTACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATTTATACATACGGCAAATGTGTTTCATCGTGACTTGAAGCCCAAAAACATTCTAGCCAATGCTGATTGCAAACTAAAAATATGTGATTTCGGGCTTGCTCGAGTTTCATTTAATGAAGCTCCATCAGCTATATTCTGGACCGACTACGTTGCAACTCGGTGGTATCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCCGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCTGTGGGAAGCCATTGTTTCCTGGAAAAAATGTAGTGCACCAATTGGATCTCATAACCGACCTGCTTGGTACTCCTCCTGCTGAAACCATTGCTAAGGCCAGTTTATCCAAATCTAGTCTACATTTTTTAACATCAATAATTCGAAATGAGAAGGCTAGAAGGTACCTTGCTAGCATGCGGAAGAAGCAACCGGTTCCATTCTCCAAAAAATTTCCAAATGCAGATCCACTGGGTCTTCATTTGCTGGAGCGATTACTTGCATTTGATCCTAAAGATCGTCCAGAAGCTGAAGAGGCACTAGGTGATCCTTATTTCCATGGTTTGTCAAATGTGGAACGCGAACCGTCCACTCAACCCATTTCAAAGCTTGAGTTTGAGTTTGAGAGGAGAAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCTCAGATGCTCCAAGAATATCTTCGTGGTGGAGAACAAACAAGCTTCATGTATCCAAGTGGGGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGAGCTCAATGGCACAGGCGAACGAACCACTCCATTGTTGAGGCATCACGCCTCCTTACCTAGAGAGCGAGTTCCTTCTCCCAAGGATGAAAATCCAGCTGGATCAGATCTTCAGAGTCTTCCGTCTGACGGGACAGATTCTGTTAACTCTGATGCACAAAATGGACCCTCCAGACCAAACTGCAGCGCACGTAGCCTGTTGAAGAGTGCTAGCATTAGTGGTTCAAAGTGTATAAATGTGAAAAAAAAAAAAGAGCCTGAGGAGGAACCACTTACAGAGGTCAACGACGAGGCTCTGGACGAGTTGACACAGAAG	1782	0.4321	MGGGGPLVDGIRRLFHRCKTINYYHHHHHHHHHHEKNNNNNANNNDYNNNNVNDIVLVRDLRTQETSSLNLLKVPARSHIKPSSMDRNKKGTPEVEFFTEYGEANRYEVQEVIGKGSYGVVCSALDAHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMFPPSRREFKDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLCGKPLFPGKNVVHQLDLITDLLGTPPAETIAKASLSKSSLHFLTSIIRNEKARRYLASMRKKQPVPFSKKFPNADPLGLHLLERLLAFDPKDRPEAEEALGDPYFHGLSNVEREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGEQTSFMYPSGVDRFKRQFAHLEELNGTGERTTPLLRHHASLPRERVPSPKDENPAGSDLQSLPSDGTDSVNSDAQNGPSRPNCSARSLLKSASISGSKCINVKKKKEPEEEPLTEVNDEALDELTQK	594

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4552g00002	594	FunFam	Mitogen-activated protein kinase	193	435	-	-
	Mupr4552g00002	594	SMART	serkin_6	107	412	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr4552g00002	594	FunFam	Mitogen-activated protein kinase	436	458	-	-
	Mupr4552g00002	594	MobiDBLite	consensus disorder prediction	521	565	-	-
	Mupr4552g00002	594	SUPERFAMILY	Protein kinase-like (PK-like)	101	417	IPR011009	-
	Mupr4552g00002	594	FunFam	Mitogen-activated protein kinase	96	201	-	-
	Mupr4552g00002	594	ProSitePatterns	MAP kinase signature.	142	245	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
	Mupr4552g00002	594	Pfam	Protein kinase domain	107	412	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr4552g00002	594	MobiDBLite	consensus disorder prediction	27	49	-	-
	Mupr4552g00002	594	ProSitePatterns	Protein kinases ATP-binding region signature.	113	137	IPR017441	GO:0005524
	Mupr4552g00002	594	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	100	464	-	-
	Mupr4552g00002	594	MobiDBLite	consensus disorder prediction	503	518	-	-
	Mupr4552g00002	594	Gene3D	Phosphorylase Kinase; domain 1	122	458	-	-
	Mupr4552g00002	594	MobiDBLite	consensus disorder prediction	491	594	-	-
	Mupr4552g00002	594	Gene3D	Transferase(Phosphotransferase) domain 1	193	435	-	-
	Mupr4552g00002	594	CDD	STKc_TDY_MAPK	106	457	-	-
	Mupr4552g00002	594	ProSiteProfiles	Protein kinase domain profile.	107	412	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4552g00002	Mupr-Chr4552	11767	18302	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4552g00002	1	594	MAP Kinase Gene Family	AT1G18150	69.357	0.0	796

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Mupr4552g00002		Pkinase	3.6e-66	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4552g00002	-		-	gmx:100776784	920.228