Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4550g00001 ATGGAATTCGACGAGCAAGAGGAGCAAGAGGAGGAAATGGAGATGCCGGAGCAGCCGCAAGCACCGCCGCCTCCGAGTTACGACTCGCTCGGGAACTCGGCGACGCGGTCAAAAATCGGCGGCGAGGGGCGCAAAGGCGCGTTCGGCGCGGCGGCCGTGCGGTACCGAGAATGCCAGAAGAACCACGCCGTGAGCTTCGGCGGCCACGCCGTCGACGGATGCTGCGAGTTCATGGCGGCCGGAGAAGACGGCACGCTGGAGGCCGTGATTTGCGCCGCCTGCAACTGCCACCGGAATTTCCACCGCAAGGAGATCGACGGCGAGATGACCTCGTTCCACCACCGCCAGCCGCCGCCTCCGCCACTGCACCACCACCAATTCTCCCCGTACTACCACCACCGCGTCCCGCAGCACCCCGCTGGCTACCTCCACCACCACCTCGCGACTCCTCCGATGGCGCAGCACCGGCCGTTAGCCCTACCGGCGGCGGCGTCCGGCGGTGGACTCAGCCGCGAAGAAGAGGACATGTCGAATCCGAGCAGCAGCGGCGGCGGTGGCGGCGGAGGATCGAAGAAACGGTTCAGAACGAAGTTCACGCCGGAACAGAAGGATAAGATGCTCGCATTCGCGGAACAACTCGGGTGGAGAATCCAGAAGCACGATGAATCTGCCGTGGAACAGTTCTGTGCTGAGACTAATGTGAAGCGAAACGTTCTCAAAGTTTGGATGCACAATAACAAGAACACTCTCGCTTATTCTAGTGTTGGCATTAGGTATGGGGTGATTAAAGTGCATGATTAG 801 0.613 MEFDEQEEQEEEMEMPEQPQAPPPPSYDSLGNSATRSKIGGEGRKGAFGAAAVRYRECQKNHAVSFGGHAVDGCCEFMAAGEDGTLEAVICAACNCHRNFHRKEIDGEMTSFHHRQPPPPPLHHHQFSPYYHHRVPQHPAGYLHHHLATPPMAQHRPLALPAAASGGGLSREEEDMSNPSSSGGGGGGGSKKRFRTKFTPEQKDKMLAFAEQLGWRIQKHDESAVEQFCAETNVKRNVLKVWMHNNKNTLAYSSVGIRYGVIKVHD 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4550g00001 266 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 54 105 IPR006456 -
Mupr4550g00001 266 NCBIfam homeobox domain, ZF-HD class 191 248 IPR006455 -
Mupr4550g00001 266 MobiDBLite consensus disorder prediction 1 15 - -
Mupr4550g00001 266 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 250 - -
Mupr4550g00001 266 SUPERFAMILY Homeodomain-like 176 249 IPR009057 -
Mupr4550g00001 266 MobiDBLite consensus disorder prediction 162 194 - -
Mupr4550g00001 266 FunFam Zinc-finger homeodomain protein 2 176 252 - -
Mupr4550g00001 266 MobiDBLite consensus disorder prediction 1 44 - -
Mupr4550g00001 266 Gene3D - 176 254 - -
Mupr4550g00001 266 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 55 104 IPR006456 -
Mupr4550g00001 266 Pfam ZF-HD protein dimerisation region 53 105 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4550g00001 Mupr-Chr4550 8825 9804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4550g00001 7 265 ZF-HD Transcription Factor Family AT4G24660 53.640 7.84e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr4550g00001 ZF-HD_dimer 6.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4550g00001 - - gmx:100776421 397.897