Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4546g00003 ATGGCGGTACCTCTTCTCTCCAAGAGGATTGTGAAGAAGCGGGTCAAGAAGTTCAAGAGGCCTCAGAGCGATCGCAAGATTTCCGTCAAGAAAGTTAAGACAAACTGGCGCAGGCCCAAGGGTATAGATTCTCGTGTTAGGAGAAAGTTCAAGGGATGTGCTTTGATGCCAAACATTGGTTATGCCTCAGACAAAAAAACTCGCCACTATCTTCCAAATGGTTTCAAAAAATTTGTTGTTCACAATGTAAAAGACTTGGAGCTACTCATGATGCACAATAGGACTTACTGTGCCGAGATTGCCCATAATATATCGACAAATAAGAGAAGGGATATTGTTCGAAGAGCTGCTCAACTTGATGTTGTTGTGACAAACGGAACAGCCAGATTACGCAGCCAGGAGGATGAATAG 411 0.4355 MAVPLLSKRIVKKRVKKFKRPQSDRKISVKKVKTNWRRPKGIDSRVRRKFKGCALMPNIGYASDKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNISTNKRRDIVRRAAQLDVVVTNGTARLRSQEDE 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4546g00003 136 Pfam Ribosomal protein L32 16 125 IPR001515 GO:0003735|GO:0005840|GO:0006412
Mupr4546g00003 136 CDD Ribosomal_L32_L32e 22 125 IPR001515 GO:0003735|GO:0005840|GO:0006412
Mupr4546g00003 136 SUPERFAMILY Ribosomal protein L32e 2 134 IPR036351 -
Mupr4546g00003 136 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 136 IPR001515 GO:0003735|GO:0005840|GO:0006412
Mupr4546g00003 136 SMART Ribosomal_L32e_2 15 125 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4546g00003 Mupr-Chr4546 9223 11576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4546g00003 1 136 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 79.412 2.16e-78 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4546g00003 K02912 - gmx:100803186 238.039