Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4540g00001 ATGAAAGCGGCTGCAGGGTTGTGCGAAGCAGAGAATAGAAAAAGAGGCGTGATAAGAAAAAGAAACGTGTGGAAGGAAGATCAATGGAGGGGACAGGTGGAGACGCAGCATAAGGCAGGTGAGTACGACTACAAACAGCTCGTGCTTCTCTCTTTTCCTTTCTTTCCCCACTCACAATTCACAATAGATGCGTGTGCCATCAACAAAACTTACATTTTCCTCACACGTGTCGCTTTCTCACCTCTCCTTTCTACTCCTTTTATCGTCTCTTCGCTTCTTTTTCTTCCCCCCCTACTCCTCTCTCAACTACGACACCGTTGCGGTATGGAGGAAGACGAGCAACTCGAACGATTCGACTCGGAGTTTGCGGCGTCCACCAGCTCCGGCTCCGCCATTTCCTCCATACTCGGCACCGACGATTTGCGGAACCTCTCCAGCTCCGGCGACATTTCTTCCATCAGCAGCGGCTCCGGCGAGATTCCGGCCGTCGCGGTGACCGAGGCGGTCCTCGCGCCGCCGTTGCTTCACCGTGCGGGGTCCAATGACGGCGCGGCGCCGCCGGCGAGGGAAAAGTGTGTGGGAAGGAGTAACAAGGGAGTGAGTTGGGGACACACTTCGGTGATTGGGAGGCGGAGAGAGATGGAGGACGCCGTCGCCGTTATTCCGGGATTCATATCTCGCACGTGCGATCACGTCGGCGGTTGTACGGCTCCCGGCTCTAGATCCTCCGGCGAGATCGCTCCCGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTCAGGTGGCTAAGTTTTGTGCGAAGCGGATGCACGATGTTATAGCAGAGGAGTGGGACCGAGAAATGGCAGGTGGCGCTGAATGGCAGAGAAGGTGGGAAGCCGTATTTGGTAACAGTTTTGAGAGGACTGACAATGAAATCCTATCAGACGCAGTTGCACCAGAAATGGTAGGATCTACTGCCTCAGTGGTGGTTCTATCCAGTTGCCAAATTATTACATCCAACTGCGGCGACTCAAGGGTAGTTCTTTGCCGCAGGACACAAACAATCCCCTTGACAGTGGATCAAAAGCCGGATAGACAAGATGAACTCTTGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGGGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGGCCATGGATTATTCCAGTGCCAGAGATAACTTTCACAGCAAGAAGTGACGAGGATGAGTGCTTAATTTTGGCAAGTGATGGACTTTGGGATGTAATGAGCAATAAAGAGGTCGGAGAAGTAGCACGCCACATTCTTAGAAGGCGCCGCAGATCTTTGTCAATGGAGGATAAATCTCCTGCACAAGTTGTTGCCGACAGCCTGACTGAAATTGCATATGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCAAAGATAAAACGTCAGCAAAGGCCTCCCATAATTTCCTAA 1503 0.513 MKAAAGLCEAENRKRGVIRKRNVWKEDQWRGQVETQHKAGEYDYKQLVLLSFPFFPHSQFTIDACAINKTYIFLTRVAFSPLLSTPFIVSSLLFLPPLLLSQLRHRCGMEEDEQLERFDSEFAASTSSGSAISSILGTDDLRNLSSSGDISSISSGSGEIPAVAVTEAVLAPPLLHRAGSNDGAAPPAREKCVGRSNKGVSWGHTSVIGRRREMEDAVAVIPGFISRTCDHVGGCTAPGSRSSGEIAPVHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWDREMAGGAEWQRRWEAVFGNSFERTDNEILSDAVAPEMVGSTASVVVLSSCQIITSNCGDSRVVLCRRTQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARSDEDECLILASDGLWDVMSNKEVGEVARHILRRRRRSLSMEDKSPAQVVADSLTEIAYGRNSKDNISIIVVDLKSKIKRQQRPPIIS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4540g00001 500 Pfam Protein phosphatase 2C 235 479 IPR001932 -
Mupr4540g00001 500 ProSitePatterns PPM-type phosphatase domain signature. 251 259 IPR000222 GO:0043169
Mupr4540g00001 500 ProSiteProfiles PPM-type phosphatase domain profile. 201 486 IPR001932 -
Mupr4540g00001 500 CDD PP2Cc 203 486 IPR001932 -
Mupr4540g00001 500 FunFam Protein phosphatase 2C 51 194 494 - -
Mupr4540g00001 500 Gene3D - 191 496 IPR036457 -
Mupr4540g00001 500 PANTHER PROTEIN PHOSPHATASE 181 486 IPR015655 GO:0004722|GO:0006470
Mupr4540g00001 500 SMART PP2C_4 191 484 IPR001932 -
Mupr4540g00001 500 SUPERFAMILY PP2C-like 194 487 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4540g00001 Mupr-Chr4540 2483 12336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4540g00001 202 496 PP2C-type Phosphatase Gene Family AT4G26080 50.476 4.34e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4540g00001 K14497 - gmx:100793293 663.299