Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4536g00004 ATGGAGAAAAGTAAGGTGGTTATGCTAATTGTGTGCTGTTTATCCTTCTGCTTCAAGCCGGCTTTGTCTAAACAAGAAATTGCCACCATTACTCCAAATCAGTCTATCCAATATGATGACACCCTTGTTTCTGCATCAAGAACCTTTGAAGCAGGATTTTTCAGTTTTGGAAGCCCACAACGCCAATACTTTGGTATAAGGTACAAGAGCATATCACCTGGGACTGTTGTGTGGGTTGCCAACAGAGATACCCCAGTACAAAATTCAACTATAGTTCTAAAACTGACTCATCAAGGGGCTCTTGTCATCATTGATGGCTTAAAGGGCCAAATCTGGTCCTCCAACTCATCAACAATTGGAAGGAACCCAGTTGTTCAGCTTCTAGACTCAGGAAACCTTGTTATAAAAGATGGAGTCAACTCAGTGAACTTCTTGTGGCAAAGCTTTGATTACCCTGGTGACACTTTCCTTGCAGGAATGAAGCTGGAGAGCAATTTAAAAAAGGGTCCATATAGGTCGCTCACTTCTTGGAGAGACACTGAAGACCCTGCTCAAGGTGACTTTTCTTTTCACATAGATGTCCATGGCCTTCCTCAACTAGTTGTAGCAAAGGGAGAGATTTTCATTTATATTTCTAGTGGAGCTTCTTGGCTAAGAATGCAAAGCTTCTTGAATGTCTCTTTTGTTGTAACTGACAAAGAAGCCTATTATGGATTTGAGAGTTCAGTTGCTTCTAGAGCAGTGCTACTTCCATCGGGAGTTTCACAAGTTTTGGTATGGTCAGATCAGAAACAGCATTGGGTGATTATATCTACTCGTCCCATGGACCAATGCGCATATTTTGGCTTTTGTGGTGCTAATTCTAATTGCAGAATTGATCAAAATCCATTATGTGAATGCTTGGAAGGTTTCATACCCAAATTTCAAGCAAAATGGGATTCTTTGGATTGGGCTGGTGGGTGTGTTAGAAGAATAAACTTAAACTGTGATGGTGGAGATGGGTTTCTTAAGTATGCAGGAATGAAGTTGCCAGACACATCTTCTTCCTGGTTTGACAAGAGCTCGAGCCTTGAGGAATGTAAGACATTGTGTTTGAAAAATTGTTCATGCTCAGCATATGCAAACTTAGATATGAGATATGATGGAAGTGGCTGCGTGCTTTGGTTTGGTAACATTGTGGACTTGAGAGTAGAAACTGACCAAGGACAAGATGTTTATATACGACTGGCATCTTCAGAACTAGGTAATTACATTTCCCTTTCTATATCTTTTGCATTTCAGTCAGGCATAACCAAAACATATAAACTCCAGTATTTGGGGAAGTTTAATAAAAAGAAGCTTGCTGGGATTGTAGTAGGCATTACCACATTCATTATAGGCCTGGCAATTCTTGGATTGGCCAGAAAAGCATTTGTACAGAGAAAAAAGAAGACAGGGATTATAGACAAAATAATTCACTGGAGGGGCAAGAGAGGGAAAGAAGACATGGACTTACCAACAATATTTGAATTTTCAACCATCTCTCATGCCACAAATCACTTTTCAAACGTTAACAAGTTAGGAGAAGGTGGATTTGGACCAGTCTATAAGGGTGTATTGGTAGATGGGCAGGAGATTGCTGTCAAGAGGTTATCTGAAACTTCTGCACAAGGAACAGAAGAGTTCAAAAATGAAATGATGTTAATGGAAACACTTCAGCACCGTAATCTTGTAAAACTTCTTGGTTGTTCTGTTCAACAAGATGAGAAGTTGTTGATCTATGAATTCATGCCCAATAGAAGCTTGGATTATTTTATTTTTGATTCAACGCGAAGTAAACTGCTAGATTGGACTAATCGCTTTCGAATTATTGATGGAATTGCTCGAGGACTTCTTTATCTTCATCAAGACTCTAGATTAAGAATCATTCATAGAGATGTCAAAGCTAGCAACATTCTTCTAGATAATGACATGAACCCAAAGATATCAGATTTTGGTTTGGCTAAAATATTTGGAGGAGATCAAGCTGAGGCCAATACTAAAAGAGTGATGGGAACATATGGTTATATGTCTCCAGAGTATGCAGTACGTGGATCTTTTTCAATCAAATCTGACATTTTTAGCTTTGGTGTCATTGTACTCGAGATAATTAGCGGAAGGAAGAATCGTGATTTTTGTGACCCTAACCATCATCATAATCTTCTTGGTCATGCATGGAGGCTATGGGTAGAAGAAAGGGCACTAGAATTAGTGGATGACATGTTAGTTGATGTGGCCACGTCGTCAGAAATACTGCGATGTATTCATGTTGGTCTTTTATGTGTACAACATAGACCCGAAAATAGGCCTAGCATGTCTTCTGTAGTTTTCATGCTGAATGGTGGAAAGTTATTCCCCGAACCAAGCCAACCTGGATTCTATACAGAAAGAGATTCCACCAAACCATCTGAAGAGCTTTCTCTAAATCATGTTTCGGTCTCAATCTTAGAGGCACGTTAG 2478 0.3955 MEKSKVVMLIVCCLSFCFKPALSKQEIATITPNQSIQYDDTLVSASRTFEAGFFSFGSPQRQYFGIRYKSISPGTVVWVANRDTPVQNSTIVLKLTHQGALVIIDGLKGQIWSSNSSTIGRNPVVQLLDSGNLVIKDGVNSVNFLWQSFDYPGDTFLAGMKLESNLKKGPYRSLTSWRDTEDPAQGDFSFHIDVHGLPQLVVAKGEIFIYISSGASWLRMQSFLNVSFVVTDKEAYYGFESSVASRAVLLPSGVSQVLVWSDQKQHWVIISTRPMDQCAYFGFCGANSNCRIDQNPLCECLEGFIPKFQAKWDSLDWAGGCVRRINLNCDGGDGFLKYAGMKLPDTSSSWFDKSSSLEECKTLCLKNCSCSAYANLDMRYDGSGCVLWFGNIVDLRVETDQGQDVYIRLASSELGNYISLSISFAFQSGITKTYKLQYLGKFNKKKLAGIVVGITTFIIGLAILGLARKAFVQRKKKTGIIDKIIHWRGKRGKEDMDLPTIFEFSTISHATNHFSNVNKLGEGGFGPVYKGVLVDGQEIAVKRLSETSAQGTEEFKNEMMLMETLQHRNLVKLLGCSVQQDEKLLIYEFMPNRSLDYFIFDSTRSKLLDWTNRFRIIDGIARGLLYLHQDSRLRIIHRDVKASNILLDNDMNPKISDFGLAKIFGGDQAEANTKRVMGTYGYMSPEYAVRGSFSIKSDIFSFGVIVLEIISGRKNRDFCDPNHHHNLLGHAWRLWVEERALELVDDMLVDVATSSEILRCIHVGLLCVQHRPENRPSMSSVVFMLNGGKLFPEPSQPGFYTERDSTKPSEELSLNHVSVSILEAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4536g00004 825 Gene3D - 22 149 IPR036426 -
Mupr4536g00004 825 ProSiteProfiles PAN/Apple domain profile. 329 410 IPR003609 -
Mupr4536g00004 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 328 409 - -
Mupr4536g00004 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 792 - -
Mupr4536g00004 825 SUPERFAMILY Protein kinase-like (PK-like) 498 785 IPR011009 -
Mupr4536g00004 825 Pfam S-locus glycoprotein domain 221 307 IPR000858 GO:0048544
Mupr4536g00004 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 149 - -
Mupr4536g00004 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 183 IPR036426 -
Mupr4536g00004 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Mupr4536g00004 825 Gene3D Transferase(Phosphotransferase) domain 1 590 790 - -
Mupr4536g00004 825 ProSiteProfiles Protein kinase domain profile. 514 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4536g00004 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 479 589 - -
Mupr4536g00004 825 Pfam PAN-like domain 329 395 IPR003609 -
Mupr4536g00004 825 CDD B_lectin 41 152 IPR001480 -
Mupr4536g00004 825 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Mupr4536g00004 825 Gene3D Hepatocyte Growth Factor 326 413 - -
Mupr4536g00004 825 Pfam D-mannose binding lectin 75 178 IPR001480 -
Mupr4536g00004 825 Pfam Protein tyrosine and serine/threonine kinase 517 782 IPR001245 GO:0004672|GO:0006468
Mupr4536g00004 825 CDD PAN_AP_plant 326 410 - -
Mupr4536g00004 825 Gene3D Phosphorylase Kinase; domain 1 488 589 - -
Mupr4536g00004 825 SMART blect_4 33 152 IPR001480 -
Mupr4536g00004 825 SMART ntp_6 330 409 IPR003609 -
Mupr4536g00004 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Mupr4536g00004 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 772 - -
Mupr4536g00004 825 SMART serkin_6 514 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4536g00004 825 CDD STKc_IRAK 520 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4536g00004 Mupr-Chr4536 13887 17430 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4536g00004 450 799 Receptor kinase-like Gene Family AT4G23230 53.409 1.95e-128 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr4536g00004 PK_Tyr_Ser-Thr 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4536g00004 - - gmx:100819820 1080.47