Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4536g00003 ATGCGAAGTAAATTACTAGATTGGACTAGGCGCTTGGAAATTATTGATGGAATTGCTCGAGGACTTTTGTATCTTCATCAAGATTCTACACTAAGAATCATACATAGAGACCTCAAAACAAGCAATATTCTTCTTGATAATAATATGATTCCAAAAATATCAGATTTTGGTTTAGCTAGAACATTTGGAGGAGATCAAGCTGAGGCAAATACAAATAGAGTGATGGGAACATATGGCTATATGCCTCCAGAATATGCAATGCATGGGTCTTTCTCAACCAAATCTGATGTTTTTAGTTTTGGTGTCATTGTACTTGAGATATTTAGTGGGAGGAAGAATCGTGGATTTCATGACCCTAACCATCATCATCTTAACCTTCTTGGCCATGCATGGAAACTATGGATTGAAGAAAGGCCACTGGAGTTAATAGATGACGTATTAGATGATGGTACAACCATAGCTTCAGAAATATTACGGTATATTCATGTGGGTCTACTTTGTGTACAACAGAATCCAGAAAATAGGCCTAACATGTCATCTGTGGTTTTAATGTTAAATGGTGGAATGCTACTTCCAAAACCAAGTCAGCCTGGGTTCTACACAGAAAAAGATAATACAATTGACACAGGATCTTCTCCAAAACAATATGAAGGGTGTTCGGTAAATGAAGTTTCAATCTCATTGTTGGATGCGCGATAG 699 0.3705 MRSKLLDWTRRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDNNMIPKISDFGLARTFGGDQAEANTNRVMGTYGYMPPEYAMHGSFSTKSDVFSFGVIVLEIFSGRKNRGFHDPNHHHLNLLGHAWKLWIEERPLELIDDVLDDGTTIASEILRYIHVGLLCVQQNPENRPNMSSVVLMLNGGMLLPKPSQPGFYTEKDNTIDTGSSPKQYEGCSVNEVSISLLDAR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4536g00003 232 SUPERFAMILY Protein kinase-like (PK-like) 4 185 IPR011009 -
Mupr4536g00003 232 Pfam Domain of unknown function (DUF3403) 190 232 IPR021820 GO:0004674
Mupr4536g00003 232 Pfam Protein tyrosine and serine/threonine kinase 5 183 IPR001245 GO:0004672|GO:0006468
Mupr4536g00003 232 Gene3D Transferase(Phosphotransferase) domain 1 1 190 - -
Mupr4536g00003 232 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 192 - -
Mupr4536g00003 232 SMART serkin_6 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4536g00003 232 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 231 - -
Mupr4536g00003 232 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4536g00003 232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 33 45 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4536g00003 Mupr-Chr4536 9990 11257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4536g00003 6 199 Receptor kinase-like Gene Family AT4G23230 57.949 2.06e-77 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr4536g00003 PK_Tyr_Ser-Thr 2.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4536g00003 - - gmx:100819820 412.92