Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4536g00002 ATGGAGAGCCAAAAGGTGCTCATATGCATGCTAATGATGTACACTACTCTCTTTTGCTTCATGCCCACTTTCTCTAAACAAGACACACTTACTATTACTCCAAATCAGTCCATCCAATATAATGACACCCTTGTTTCTACAGAAGGAATCTTCGCAGCAGGATTTTTCGACTTTGGAAATTCAAGACGTCAATACTTTGGTATATGGTACAAGAGCATATCACCTATGACTATTGTGTGGGTTGCCAACAGGAATGCTCCACTACAAAACTCAACAGCAGTTCTGAGACTTACTCATCAGGGAAATCTTGTGATTCTTGATGGCTCCAGTGACATAGTTTGGTCCTCCAACTCATCAAGAATTGTAGCGAAACCCATTATGCAGCTTCTAGATTCTGGAAACCTTGTTGTGAAAGATGGGGACAGCACAGAGAACTTCTTGTGGCAAAGCTTTGATTATCCAGGCGACACTTTCCTGGCTGGAATGAAACTGAAAAGCAATTTAGTTAATGGTCCATACAAGTATCTAACATCTTGGAGAGACTCTGATGATCCAGCAGAAGGTGAGTTTTCATATCGCATAGCTCCTCAAGGCTTTCCTCAACTAGTTACTACCCAAGGAGCAACAATTTTTTACAGCGCAGGGCCGTGGAATGGCTATCAATGCAGTGGATATTCTTGGTCAAGAATGCATAGATTCTTGAATTTCTCTTTAGTATTAACTGACAAAGAAGTTTCTTATGAATACCAAACATGGAACAGTTCAGTACTTACTAGAACAGTGCTCAAGCTCAATCCGACGGGAACTACACAGCGACTTCTATGGTCAGATCGAACAAAAAGTTGGGAGATTATAGGCACCCGTCCTATAAACCAGTGTGAATATTATGCATTTTGTGGGGTCAACTCTAACTGCAATATTAATGCTTTTCCAATATGTGAATGCTTGCAAGGTTTCACACCAAAATTTCAAGCAAAGTGGGATTCACATGATTGGTATGGTGGGTGTGTCAGAAAAATAAAACCAAATTGTGATAGTGGAGATGGGTTTTTGAAGTACACAGGAATGAAGTTGCCAGATACGTCTTCTTCCTGGTATAACAAGAGCTCGAGCATTGAGGAATGTGAGACATTGTGTTTGAGAAACTGCTCTTGTTCTGCATATGCAAATTTAGATGTCAGAGATGCTGGTAGTGGCTGCTTGCTTTGGTTTCATAACATTGTGGACTTGAGAAATCACACAGACCAAGGACAAGAAATTTATATACGACTGTCACTTTCTGAACTCGATCAGAGAAGGAATAAGAAGAACTTGAATAGAAAGAAGTTTGCAGGGACTGTAGCAGGACTTATTGCATTTGTTATAGTACTAACAGTTCTTGTGTGGGCGACTTCAACATTTATAAAAAGGATGAATCTAGGCAAGCCAGGGATTATAAAGAAACTACTTCACTGGAAGCACACGAAGGAGAAGGAAGATGATGACATGCCAACAATATTTGATTTTTCAGCCATCCATATTGCCACAAATCACTTTTCTGACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTATACAAGGGCATATTGATAGATGGACAAGAGATTGCAGTCAAGAGGCTTTCTAAAACTTCGAGACAAGGAATTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAGCACCGCAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAGAAGTTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGGTTTGACGTTTCACACCCAACAAATTTATTGCTTTAATTTTTCTCTTTCCATCACGTAG 1854 0.3954 MESQKVLICMLMMYTTLFCFMPTFSKQDTLTITPNQSIQYNDTLVSTEGIFAAGFFDFGNSRRQYFGIWYKSISPMTIVWVANRNAPLQNSTAVLRLTHQGNLVILDGSSDIVWSSNSSRIVAKPIMQLLDSGNLVVKDGDSTENFLWQSFDYPGDTFLAGMKLKSNLVNGPYKYLTSWRDSDDPAEGEFSYRIAPQGFPQLVTTQGATIFYSAGPWNGYQCSGYSWSRMHRFLNFSLVLTDKEVSYEYQTWNSSVLTRTVLKLNPTGTTQRLLWSDRTKSWEIIGTRPINQCEYYAFCGVNSNCNINAFPICECLQGFTPKFQAKWDSHDWYGGCVRKIKPNCDSGDGFLKYTGMKLPDTSSSWYNKSSSIEECETLCLRNCSCSAYANLDVRDAGSGCLLWFHNIVDLRNHTDQGQEIYIRLSLSELDQRRNKKNLNRKKFAGTVAGLIAFVIVLTVLVWATSTFIKRMNLGKPGIIKKLLHWKHTKEKEDDDMPTIFDFSAIHIATNHFSDRNKLGEGGFGPVYKGILIDGQEIAVKRLSKTSRQGIEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFIFGLTFHTQQIYCFNFSLSIT 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4536g00002 617 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Mupr4536g00002 617 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 597 - -
Mupr4536g00002 617 Gene3D Phosphorylase Kinase; domain 1 485 587 - -
Mupr4536g00002 617 Pfam Protein tyrosine and serine/threonine kinase 516 597 IPR001245 GO:0004672|GO:0006468
Mupr4536g00002 617 Gene3D Hepatocyte Growth Factor 342 427 - -
Mupr4536g00002 617 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Mupr4536g00002 617 CDD B_lectin 41 154 IPR001480 -
Mupr4536g00002 617 Gene3D - 23 151 IPR036426 -
Mupr4536g00002 617 SUPERFAMILY Protein kinase-like (PK-like) 493 604 IPR011009 -
Mupr4536g00002 617 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 151 - -
Mupr4536g00002 617 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Mupr4536g00002 617 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 185 IPR036426 -
Mupr4536g00002 617 Pfam PAN-like domain 344 410 IPR003609 -
Mupr4536g00002 617 Pfam D-mannose binding lectin 77 180 IPR001480 -
Mupr4536g00002 617 ProSiteProfiles Protein kinase domain profile. 512 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4536g00002 617 CDD PAN_AP_plant 341 425 - -
Mupr4536g00002 617 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 343 424 - -
Mupr4536g00002 617 SMART ntp_6 345 424 IPR003609 -
Mupr4536g00002 617 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 477 587 - -
Mupr4536g00002 617 SMART blect_4 35 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4536g00002 Mupr-Chr4536 7451 9950 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4536g00002 440 598 Receptor kinase-like Gene Family AT4G23320 49.390 2.11e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr4536g00002 S_locus_glycop 2.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4536g00002 - - gmx:100819820 983.786