Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4523g00001 ATGTCAGGATTGGAACTCGTACCCATAGGTACAATTTTGACAGTGGTAACTAACCAAGTCTTGAAAACAGCTCACGCAGCATCTGATGTTCTTATTGGTAAAGAAAGTTTCAAGGCCCTTTCAAAACATCTATTTGATATTGAGCCTGTGCTAAAGGAATTACAGCTTCAAGAATTGAACGACTCTCAAGCAGCAAGGGTTGCTCTGGAATCTCTTGAAGCAGATGTCAAGAAGGCAAACAATTTGATTGACAAGTATGGGAACCGTGGCCGTTTCTACTTGTTGTTCAAGTGCCGATCCATAGTTGAGGAGGTTGAACAAGTCACAAGGGATATTGGAAAATCTCTGGCTGCATTGTCTATTGCAAATACTGAAGTCCTATCAAGAATTTCTGATCAGGTCAACAGACTACAAAATGAGATGCAAAGGGTGGAGTTTGAGGCTTCACAATCTCAGATTCAAATTGTTGACAAGTTGAACCAGGGACTTAGAGAACAGAAACTAGATCAGACTTTTGCAAATGACATTCTAGAGGAGATAGCAAGGGCAGTTGGTGTGCCAGTGGAGCCCTCAGAGATAAGCAAAGAGTTGGCCAGCATTAGGTGGGAAAAAGAAGAAGCTGCCAACAGGAAAGAAAGAGCTGAATGTGTTTTTTTGGAGCAGATCATTAAATTACTCTCTAGGGCTGATGCAGCTAGGGATTATGAAGAAGTGAAGAGGCAATACTTTGAAAGGGTTAAGTTCATAGAGAACTATGATTCAAGGGAAAAACATATCTCCCCACTCGGAACTTTCTTTTGTTCTATAACTGGAGCTGTTATGGAAGATCCTGTCAGCCTTTGCACTGGTACTACATGTGAGAGATCTGCTATTGAAGCTTGGTTTAATGATGACAACAGGACAGACCCAGAAACTAAAGAGGTTCTTGAAGATACTACCTTGAGGTCTAACGTTCGACTTAGAGAATCCATTGAAGAGTGGAGAGAACTTAATTACTGTATCGAAGTAAGGTCAATCAGGGAAAATTTATTATCAAATTCTGACCTGCAAGAATCCCTGAGCCAAATACAGGCTCTAGTAAGAGAGAATTCTATTAACAAGGATTGGATTTCTATAGGAGAGCTTACTGTTATTGTTATCTCTATCCTTGGGAGCTCTGATGACAGAGAAGTGAAGATGAAGATTTTGATAACTTTGAAGGATGCTGTAGAGGGGAATGCAAGAAACAAGGAGAAAGTGGCTGAATCTGAAGGATGGGATCACATTATTTCCTGCTTAGGGAGTGACTATAGCATTTCAAAGGCAGCAATTGATTTGCTATATGAGTTGCTTCAAGAACAATCCGGTTGGAATGAATGTTTCTGCAAAAAGCTTTCTGAAAATCACACTGCAGTTTGTTCCCTTGTCGCCCTTCTAAAGAATCCTGTCAACCATTCTGCTGAGGTAGCAGAAAAGATTTTGGTGAAGCTTTTTGAACTAAACGAGGAAACCATTACTATTGCTGCTAATTTTGGCTGGTATAAACCACTTGTTGATCGCATGATTCAAGGACCGGATTCAAGAATATCAATGACAAAAGCCATAGTTAATATGGAGTTGAATGATTCAAACTTGAAACTCCTTGGCAAGGAAGGAGTTATACCTCCTTTGCTAGAAATGCTGTCGGGCAATGTTGAATCAAAAGACTTGTCATTGTCAGCCCTGGTTAAATTAGCAGGATCTCATGCAAATAAGGGAATTATAGCTGCATCTGGAGGAGTTCCTCTTATTCTGGATTTAATGTTCTCTCCTCGGTCACGGACATTCATTATCATTAAATGCTCTGAAATCATTGAGAAGCTTTCTTCAGATGGTGAGGGAATTGACTTCTTTGTTGATGGAGAAGGGAAACAACTTGAGTTAGATTCCATAATCACTAGTTTACTAGCTTTGCAGGAGAATTCCAACTCAAGTCACAACATTCGTAAGCCTGCACTGCGTGCTCTTCTTGGCATTTGCAAGTTTGAGACTGGTTTGGTTAAGAAAGCAATTCTTGCAGCCAATGGTGTATCTCTATTCCCACTTCTTGATGACCCTGACTCAGAAATCAGGGAAACTTCCATAATTGTGCTCTTTCTTTTCTCTCAACACGAGCCAGAAGGAATAGTTGAATACCTCTTGAGGCCTAGAAGGCTGGAAGCCTTGATTGGATTTCTTGAGAATGAAGACAATGATAATGTGCAGATGGCTGCTGCTGGTTTACTTGCTAACCTGCCAAAATCAGAACGAGAACTCACTATGAAGTTGATAGAGTTGGGTGGACTTGATGCAATCATAAGCATTTTCAAAACTGGCAAAATGGAAGCAAAAGAAAATGCTCTCAGTGCACTCTTCAGGTTCACAGACCCTACAGACATTGAGTCACAGCGTGATTTGGTTAAGCGCGGGATATATCCATTGCTTGTAGATTTTCTCAACACTGGTTCAGTCACAGCAAAGGCAAGAGCAGCAGCTTTCATTGGCGATCTTTCTATGAGCACTCCAAAGCTCACAGTTGTTCCCAAACCAACTGGTTGCTGGCTTTTCAGATCATCACGTGTTCCTTTATGTTCAGCACATGGGAGTGTGTGCAGTGTGAACACCACATTTTGTCTGTTGGAAGCAAAGGCTTTGCCTGGCTTGATAAAGCTGTTACATGGGGAGGTTCATGCAACTGCTTATGAAGCAATACAGACACTTTCCACATTGGTTTTGGAAGACTTTCCCCAAAGGGGAGCTCGTGTCTTACATGAGTCTAATGCAATAAGATCCACATTGGACATTTTGAACTGGGGAACTGATTCTCTAAAAGCAGAAGCTCTAGGACTCTTGGAGAAGGTGTTTGTGTCAAAGGAAATGGTAGAATACTATGGAACAACAGCTAGATCACGTCTAATTTGTTTGACTGGCATGAATATATATGGAGATGGCCACCTCAGGAGAAAGGCTGCTAAGGTACTATCATTGCTTGAACGCTATTCAAAGTCATCATCATCTGCAATCTCTGGACTTCTGGAGTAA 3039 0.4116 MSGLELVPIGTILTVVTNQVLKTAHAASDVLIGKESFKALSKHLFDIEPVLKELQLQELNDSQAARVALESLEADVKKANNLIDKYGNRGRFYLLFKCRSIVEEVEQVTRDIGKSLAALSIANTEVLSRISDQVNRLQNEMQRVEFEASQSQIQIVDKLNQGLREQKLDQTFANDILEEIARAVGVPVEPSEISKELASIRWEKEEAANRKERAECVFLEQIIKLLSRADAARDYEEVKRQYFERVKFIENYDSREKHISPLGTFFCSITGAVMEDPVSLCTGTTCERSAIEAWFNDDNRTDPETKEVLEDTTLRSNVRLRESIEEWRELNYCIEVRSIRENLLSNSDLQESLSQIQALVRENSINKDWISIGELTVIVISILGSSDDREVKMKILITLKDAVEGNARNKEKVAESEGWDHIISCLGSDYSISKAAIDLLYELLQEQSGWNECFCKKLSENHTAVCSLVALLKNPVNHSAEVAEKILVKLFELNEETITIAANFGWYKPLVDRMIQGPDSRISMTKAIVNMELNDSNLKLLGKEGVIPPLLEMLSGNVESKDLSLSALVKLAGSHANKGIIAASGGVPLILDLMFSPRSRTFIIIKCSEIIEKLSSDGEGIDFFVDGEGKQLELDSIITSLLALQENSNSSHNIRKPALRALLGICKFETGLVKKAILAANGVSLFPLLDDPDSEIRETSIIVLFLFSQHEPEGIVEYLLRPRRLEALIGFLENEDNDNVQMAAAGLLANLPKSERELTMKLIELGGLDAIISIFKTGKMEAKENALSALFRFTDPTDIESQRDLVKRGIYPLLVDFLNTGSVTAKARAAAFIGDLSMSTPKLTVVPKPTGCWLFRSSRVPLCSAHGSVCSVNTTFCLLEAKALPGLIKLLHGEVHATAYEAIQTLSTLVLEDFPQRGARVLHESNAIRSTLDILNWGTDSLKAEALGLLEKVFVSKEMVEYYGTTARSRLICLTGMNIYGDGHLRRKAAKVLSLLERYSKSSSSAISGLLE 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4523g00001 1012 Gene3D - 516 844 IPR011989 -
Mupr4523g00001 1012 SMART arm_5 626 667 IPR000225 GO:0005515
Mupr4523g00001 1012 SMART arm_5 711 753 IPR000225 GO:0005515
Mupr4523g00001 1012 SMART arm_5 798 838 IPR000225 GO:0005515
Mupr4523g00001 1012 SMART arm_5 406 445 IPR000225 GO:0005515
Mupr4523g00001 1012 SMART arm_5 534 573 IPR000225 GO:0005515
Mupr4523g00001 1012 SMART arm_5 871 911 IPR000225 GO:0005515
Mupr4523g00001 1012 SMART arm_5 755 795 IPR000225 GO:0005515
Mupr4523g00001 1012 SMART arm_5 574 616 IPR000225 GO:0005515
Mupr4523g00001 1012 SMART Ubox_2 264 327 IPR003613 GO:0004842|GO:0016567
Mupr4523g00001 1012 Gene3D - 341 505 IPR011989 -
Mupr4523g00001 1012 SUPERFAMILY ARM repeat 364 834 IPR016024 -
Mupr4523g00001 1012 Coils Coil 127 154 - -
Mupr4523g00001 1012 Pfam U-box domain 265 329 IPR003613 GO:0004842|GO:0016567
Mupr4523g00001 1012 CDD MLKL_NTD 10 145 - -
Mupr4523g00001 1012 SUPERFAMILY RING/U-box 249 329 - -
Mupr4523g00001 1012 Coils Coil 62 89 - -
Mupr4523g00001 1012 ProSiteProfiles U-box domain profile. 260 334 IPR003613 GO:0004842|GO:0016567
Mupr4523g00001 1012 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 723 751 IPR000225 GO:0005515
Mupr4523g00001 1012 CDD RING-Ubox_PUB 265 314 IPR045210 -
Mupr4523g00001 1012 Gene3D - 852 1008 IPR011989 -
Mupr4523g00001 1012 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 11 1004 - -
Mupr4523g00001 1012 Gene3D - 6 124 IPR036537 GO:0007166
Mupr4523g00001 1012 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 338 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4523g00001 Mupr-Chr4523 7434 11480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4523g00001 265 964 U-box Gene Family AT1G76390 27.660 1.05e-44 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4523g00001 - - gmx:100783638 1731.07