Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4519g00005 ATGGAGCTAAAAAATGAGAAGCTAGTCAGGTTCTCCAATGATGGAAAACATACTCTTGAACCTCCTTGGGAAATGATAGACTCCCACAAACACCATGAGAATGCATTTCCAGTTTATCCAGAATGCAAAATGAGTAGTGGTGACAAGAACAGGATGAGTATCAGAATTCCCTCCCTTGGAAAGTTGAAGGTTTTCCCAGAAAATCACGAGCCATGGAAGAAGAGAATTCTTGATCCTGGCAGTGATTTCATTTTGGAGTGGAACCGCGCTTTCCTGTTTTCTTGCATTCTAGCACTGTTTGTTGATCCACTGTTTTTCTACCTCCCCTCAGTGGCAAATGATGGAAACTCATCGTGTATGGCTACTGATTTGAATATAGGAATTGTTGTGACATGTTTTCGGACATTTGCTGATGTTTTCTATCTGCTCAACATGGTCATCAAGTTCAGAACGGCCTACGTGTCACCAAGTTCAAGGGTTTTTGGAAGGGGTGAGCTTGTTATGGATCCTAGGTTGATTGCAAGGCGGTATTTGAGATCAGAGTTCTTCCTAGATCTTGTTGCTACACTGCCTCTTCCCCAGATTGTGATTTGGTTTATTATGCCAGCAATTAGAAGCTCCCATGCTGATCATACCAACAATGCACTTGTACTGATTGTTCTGCTTCAATATGTCCCCAGATTATATTTGATTTTCCCATTAAGTTCTCAGATTATTAAGGCCACTGGTGTGGTTACAAAGACAGCTTGGGCTGGAGCTGCTTACAATCTTTTACTTTACATGTTAGCTAGTCATGTCTTGGGAGCTTCATGGTACTTATTATCAATTGAAAGGCATGCTACTTGCTGGAAATCTGAATGCAGAAATGAAAGCCTCCCTGTAAAATGTGTTCTTAAGTACTTAGATTGTAGTACTTTAAACAATGATGATCGCATGAAGTGGGTAAACACTACTTCTGTGTTTGGTAACTGCAATCCAGAAAACAGCACCAGTTTCAACTATGGCATTTTTGGAAATGCAGTGGAAAATAATGTTGTTTCCTCTGCGTTTATAGAGAAGTATCTCTATTGTCTGTGGTGGGGCTTGCAGAACTTAAGTTCCTATGGCCAGAGTTTGACTACAAGTACATTCGTTTGGGAAACTGCATTTGCAATACTCATAGCTATTCTGGGCCTGGTTTTATTTGCCCACTTAATTGGTAACATGCAGGAACACCTAAGCATGCTCAATTCAATGCAGACCTATTTGCAATCCATTACCGTGAGGCTTGAAGAATGGAGGCTCAAGCGACGTGACACTGAGGAGTGGATGAAACATCGCCAACTCCCACAAAAACTCAGAGAGCGTGTCCGAAGATTTGTTCAATACAAATGGCTTGCAACTCGTGGGGTTGATGAAGAAACAATCCTACGTGGCCTGCCTACTGACCTACGTAGAGATATCCAACGCCACCTTTGCTTGGACCTTGTTCGACGTGTTCCCTTTTTCTCACAAATGGATGATCAGCTACTTGATGCAATATGTGAGAGATTGGTATCATCCTTGAGTACTCAGGGCACGTACATAGTAAGAGAAGGAGACCCTGTTACAGAGATGCTTTTTATCATAAGAGGGAGACTTGAAAGCTCAACCACAAATGGAGGCAGAACTGGTTTCTTTAACTCTATTACCTTGAGGCCTGGTGATTTCTGTGGAGAAGAGCTACTTGCTTGGGCATTGCTTCCAAAATCTACACTCAACTTGCCTTCTTCTACAAGAACAGTTAAGGCCCTTGTGGAAGTGGAAGCCTTTGCACTAAGAGCAGAAGATCTTAAATTTGTGGCCAATCAGTTTAGACGTCTCCACAGCAAGAAGTTACAGCACACTTTCCGTTTCTACTCTTACCATTGGAGGACATGGGCAGCATGCTTCATTCAGGTTGCCTGGCGCCGGTTCAAGAAGAGAATGATGGCAAAGAGCCTTAGCTTGAGGGAATGCCAGCCCTTTAGTTATGATGAACAAGTCAGGGATAGAATGGAACACAAGGAGGAAGAGCACAGTGCAGTAACTTCAAACACTGCACAAGTGAAACAGAACCTAGGTGTCACTATACTGGCTTCAAGATTTGCTGCAAACACAAGGAGAGGGGTTCAGAAGATCAAGGATGTAGAGATGCTCAACTTTCAAAAGCCTGAAGAGCCAGACTTTTCAGTAGAGCCTGATGATGATTAA 2211 0.427 MELKNEKLVRFSNDGKHTLEPPWEMIDSHKHHENAFPVYPECKMSSGDKNRMSIRIPSLGKLKVFPENHEPWKKRILDPGSDFILEWNRAFLFSCILALFVDPLFFYLPSVANDGNSSCMATDLNIGIVVTCFRTFADVFYLLNMVIKFRTAYVSPSSRVFGRGELVMDPRLIARRYLRSEFFLDLVATLPLPQIVIWFIMPAIRSSHADHTNNALVLIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERHATCWKSECRNESLPVKCVLKYLDCSTLNNDDRMKWVNTTSVFGNCNPENSTSFNYGIFGNAVENNVVSSAFIEKYLYCLWWGLQNLSSYGQSLTTSTFVWETAFAILIAILGLVLFAHLIGNMQEHLSMLNSMQTYLQSITVRLEEWRLKRRDTEEWMKHRQLPQKLRERVRRFVQYKWLATRGVDEETILRGLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQVAWRRFKKRMMAKSLSLRECQPFSYDEQVRDRMEHKEEEHSAVTSNTAQVKQNLGVTILASRFAANTRRGVQKIKDVEMLNFQKPEEPDFSVEPDDD 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4519g00005 736 ProSiteProfiles cAMP/cGMP binding motif profile. 495 578 IPR000595 -
Mupr4519g00005 736 FunFam Cyclic nucleotide-gated ion channel 1 493 611 - -
Mupr4519g00005 736 Pfam Ion transport protein 87 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr4519g00005 736 CDD CAP_ED 495 626 IPR000595 -
Mupr4519g00005 736 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 68 729 - -
Mupr4519g00005 736 SMART cnmp_10 495 626 IPR000595 -
Mupr4519g00005 736 SUPERFAMILY cAMP-binding domain-like 425 617 IPR018490 -
Mupr4519g00005 736 SUPERFAMILY Voltage-gated potassium channels 79 407 - -
Mupr4519g00005 736 FunFam Cyclic nucleotide-gated ion channel 1 422 486 - -
Mupr4519g00005 736 Gene3D Helix hairpin bin 422 486 - -
Mupr4519g00005 736 Pfam Cyclic nucleotide-binding domain 518 606 IPR000595 -
Mupr4519g00005 736 Gene3D Jelly Rolls 493 613 IPR014710 -
Mupr4519g00005 736 Gene3D - 93 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4519g00005 Mupr-Chr4519 55893 59981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4519g00005 10 732 Ion Channels AT2G24610 70.027 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4519g00005 K05391 - gmx:100803334 1382.08