Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4508g00008 ATGGACAACCACATCTACGCCTCCTCCTACAGCCCTTCCACCAACTACAGATTCCTCGACACAGAGGCCTCCGCCGCCACCATGTTCCTCTCCCACCACCGCTCCGATGCCGCCCTCCGCTTCCCCTCTGCTTCCGTCGACGCCGACATTGCCCCGCCCGGTGTCACCTCAAGAATCACCTCTTCTGCTGCCGCCAACCTCCTCTCCTCCTGGCCCCCCGCCGCCGCTCATTCCGCCCTTGACCTCAAACGCTCTTCCGACGCACTGTACCATCCAACCATTTTGGGTACAATTGGGCAAAGTGAAGCTTGGTATTCTACAAACTCACTGGCCAAGCGCCCTAGATATGAAAGTGCTTCCAATATACCTATGTATCCCCAGAGGCCAGGAGAGAAGGATTGTGCCCACTATATGCTCACAAGAACCTGTAAGTTTGGAGATAGCTGCAAGTTTGACCATCCTATTTGGGTTCCTGAGGGTGGAATCCCGGATTGGAAAGAGGTTCCAAATGTTGTTACAAGTGATACTCCTCCTGAGAGACCAGGGGAACCAGATTGTCCATACTTTCTGAAAACTCAAAGATGCAAGTTTGGTTCAAAGTGCAAATTTAATCATCCCAAGGTTTCCTCTGAAAATGCTGATGTTTCTTCTGGCTTGCCTGATAGGCCATCAGAGCCCCCTTGTGCGTTCTACATGAAAACTGGAAAATGTAAATTTGGTGCTGCTTGTAAATTCCATCACCCCAAAGATATCCAGATTCAGTTGTCTGATGACTTGAGTCATACTGTTTCACAGAAGCTCACTAATTCTATGATGGGAGGGGCAACGGGAGATACACAGCCAATTAAGTCTCTTATATCTCCATCAATGCAGAATAGCAAAGGGCTTCCAGTAAGACTGGGGGAAGTGGATTGTCCATTCTACATGAAAACTGGGAGTTGCAAGTATGGTGCCACTTGCCGCTACAATCATCCGGACAGGAATGCAATTAATCCATCCATTGCTGCATTAGGCCCGTCTATTTTGCCATCCTCAACTGCTAATCTGAATATCGGAGTTCTTAATCCAGCTGTATCTGTTTATCAGGCTTTTGACCCAAGGCTGTCAAATCCAATGATGGGAATTGCAGAAACTCTCTATCCTCAGCGACCTGGACAGATTGAATGCGATTTTTACATGAAAACTGGCGAGTGTAAATTCGGGGAAAGATGCAAGTACCATCACCCAATTGACCGCTCAGCACCATCACTGTCAAAGCAGGCTACTGTTAAACTCACTCCTGCAGGATTACCAAGAAGAGAGGGTGCTGTTATCTGTCCATATTATTTGAAAACTGGAACATGCAAGTTTGGTGCAACCTGCAAGTTTGACCACCCACCACCTGGAGAAGTTATGGAGATGGCAAAATCACAAGGAACATCAGCCAATGGAGGGGAGGAAGCAGAAAGCGATGAAAAGGAGACTTTTGCACCGGAACAGCATTGA 1485 0.4801 MDNHIYASSYSPSTNYRFLDTEASAATMFLSHHRSDAALRFPSASVDADIAPPGVTSRITSSAAANLLSSWPPAAAHSALDLKRSSDALYHPTILGTIGQSEAWYSTNSLAKRPRYESASNIPMYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPNVVTSDTPPERPGEPDCPYFLKTQRCKFGSKCKFNHPKVSSENADVSSGLPDRPSEPPCAFYMKTGKCKFGAACKFHHPKDIQIQLSDDLSHTVSQKLTNSMMGGATGDTQPIKSLISPSMQNSKGLPVRLGEVDCPFYMKTGSCKYGATCRYNHPDRNAINPSIAALGPSILPSSTANLNIGVLNPAVSVYQAFDPRLSNPMMGIAETLYPQRPGQIECDFYMKTGECKFGERCKYHHPIDRSAPSLSKQATVKLTPAGLPRREGAVICPYYLKTGTCKFGATCKFDHPPPGEVMEMAKSQGTSANGGEEAESDEKETFAPEQH 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4508g00008 494 MobiDBLite consensus disorder prediction 463 494 - -
Mupr4508g00008 494 SUPERFAMILY CCCH zinc finger 386 411 IPR036855 GO:0046872
Mupr4508g00008 494 FunFam Zinc finger CCCH domain-containing protein 37 166 213 - -
Mupr4508g00008 494 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 182 207 IPR000571 GO:0046872
Mupr4508g00008 494 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 437 460 IPR000571 GO:0046872
Mupr4508g00008 494 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 130 154 IPR000571 GO:0046872
Mupr4508g00008 494 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 225 249 IPR000571 GO:0046872
Mupr4508g00008 494 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 386 409 IPR000571 GO:0046872
Mupr4508g00008 494 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 302 325 IPR000571 GO:0046872
Mupr4508g00008 494 ProSiteProfiles Zinc finger C3H1-type profile. 299 327 IPR000571 GO:0046872
Mupr4508g00008 494 SUPERFAMILY CCCH zinc finger 226 250 IPR036855 GO:0046872
Mupr4508g00008 494 SMART c3hfinal6 180 207 IPR000571 GO:0046872
Mupr4508g00008 494 SMART c3hfinal6 128 155 IPR000571 GO:0046872
Mupr4508g00008 494 SMART c3hfinal6 433 460 IPR000571 GO:0046872
Mupr4508g00008 494 SMART c3hfinal6 383 410 IPR000571 GO:0046872
Mupr4508g00008 494 SMART c3hfinal6 222 249 IPR000571 GO:0046872
Mupr4508g00008 494 SMART c3hfinal6 299 326 IPR000571 GO:0046872
Mupr4508g00008 494 SUPERFAMILY CCCH zinc finger 303 326 IPR036855 GO:0046872
Mupr4508g00008 494 ProSiteProfiles Zinc finger C3H1-type profile. 383 411 IPR000571 GO:0046872
Mupr4508g00008 494 ProSiteProfiles Zinc finger C3H1-type profile. 128 156 IPR000571 GO:0046872
Mupr4508g00008 494 PANTHER PROTEIN PHOSPHATASE RELATED 288 347 - -
Mupr4508g00008 494 Gene3D - 381 475 - -
Mupr4508g00008 494 Gene3D - 127 219 - -
Mupr4508g00008 494 SUPERFAMILY CCCH zinc finger 185 206 IPR036855 GO:0046872
Mupr4508g00008 494 MobiDBLite consensus disorder prediction 479 494 - -
Mupr4508g00008 494 Gene3D - 221 336 - -
Mupr4508g00008 494 ProSiteProfiles Zinc finger C3H1-type profile. 433 461 IPR000571 GO:0046872
Mupr4508g00008 494 ProSiteProfiles Zinc finger C3H1-type profile. 180 208 IPR000571 GO:0046872
Mupr4508g00008 494 SUPERFAMILY CCCH zinc finger 437 460 IPR036855 GO:0046872
Mupr4508g00008 494 ProSiteProfiles Zinc finger C3H1-type profile. 222 250 IPR000571 GO:0046872
Mupr4508g00008 494 FunFam zinc finger CCCH domain-containing protein 37 381 474 - -
Mupr4508g00008 494 SUPERFAMILY CCCH zinc finger 130 155 IPR036855 GO:0046872
Mupr4508g00008 494 FunFam Zinc finger CCCH domain-containing protein 37 87 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4508g00008 Mupr-Chr4508 17381 27156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4508g00008 284 475 C2H2 Transcription Factor Family AT3G02830 34.197 1.39e-29 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr4508g00008 zf-CCCH 1.6e-10 CL0537