Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4497g00009 ATGTCACGCAATTTTGGTGAAGTACCCTTTGATGTTTTTGCAGGCATTGTTAGGACAATTCTACACATTGTTGGCATCCAAGTTTCATCATCTCCTTCACCAGACATCTCCCAGAACCCACCTGAGCCATTTGAATTCCACCTCAGTCCCTCAGAGGGATTCATTGAAGAGTTCAGAAGCAAGACACCAACACTTAGGTTTGGCAGCATGTGTGGATTTAAACTACCTCAGCATGAATGCTGTGTGTGTCTCACAAAGTTTGAACCAGAATCAGAGATAAACAGTTTATCCTGTGGCCATCTTTTTCATAAAGTTTGCTTGGAGAAATGGTTGGACTACTGGAACATTACATGCCCACTTTGCAGGACTCCCTTCATGCCTCAAGATGATACATCTTGCCCTTGGTAA 408 0.4314 MSRNFGEVPFDVFAGIVRTILHIVGIQVSSSPSPDISQNPPEPFEFHLSPSEGFIEEFRSKTPTLRFGSMCGFKLPQHECCVCLTKFEPESEINSLSCGHLFHKVCLEKWLDYWNITCPLCRTPFMPQDDTSCPW 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4497g00009 135 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 128 IPR013083 -
Mupr4497g00009 135 PANTHER - 12 130 IPR044249 -
Mupr4497g00009 135 SUPERFAMILY RING/U-box 79 128 - -
Mupr4497g00009 135 Pfam Ring finger domain 79 122 IPR001841 -
Mupr4497g00009 135 SMART ring_2 80 121 IPR001841 -
Mupr4497g00009 135 ProSiteProfiles Zinc finger RING-type profile. 80 122 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4497g00009 Mupr-Chr4497 20388 21972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4497g00009 8 129 C3H Transcription Factor Family AT2G04240 51.515 2.99e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4497g00009 K16285 - gmx:100306440 229.565