Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4485g00002 ATGCTTCCGTTTCGGAGATTCTACGGCTTCGAGAGTTGGCTAGACCACGAGTCAGACCACGTTACCAGCTCCTTCATCAAGAAGGCAGTGGAGTTCGACGGTGCCAGATCAAAATCGGAGCGCAAATCAACGGAAGCATGCAAGAGTCACAGGGAAGCCGAGAGGAGACGCAGGCAGAGAATCAACGCACACCTCTCTACCTTACGTTCTCTCCTTCCTAATGCCGCCAAGTCTGATAAGGCGTCGTTGCTGGGAGAAGTGGTTGAGCACGTGAAGCGGCTGAGGAAGGAGGCCGATGACGTGGCGTGTGGGGAGTCGTCGTCCTCGTGCAGCGCCGAACCGGGTTCGGTTCGGTCTGAGGCGTGGCCGTTTCCCGGGGAGTGCGACGAGGCGACGGTGAGTTACTGCGATGGCGACGACGGGGAACCGCGGCGGGTGAAGGCGACGGTGTGCTGTGAGGACCGGGCCGGTCTGAACCGGGACATGGCGCAGGCAATCCGGTCGGTTCGGGCCAAACCGGTTCGCGCGGAGATGATGACGGTTGGGGGACGGACCAAGAGTGTTGTGGTGATAGAGTGGCCTGCGAAGGATGGTGGTGAAGCGAAAGAGGTGGAGGGAGAGGAGGTTGGGGCGCTGGAACGGGCTTTGAAAGCTGTGGTAGAGAATCGGGCTTTGGTGGGCTACGGAATGGGCCCAGTGGTTTTGGGCCAGAAACGGGCTAGGGATTATGGTTCGCCTAGTACTAGTGAGGTTGACTCTGCTTTCTTGTTGAGGAATGGGAACTTCTGCTAA 792 0.5884 MLPFRRFYGFESWLDHESDHVTSSFIKKAVEFDGARSKSERKSTEACKSHREAERRRRQRINAHLSTLRSLLPNAAKSDKASLLGEVVEHVKRLRKEADDVACGESSSSCSAEPGSVRSEAWPFPGECDEATVSYCDGDDGEPRRVKATVCCEDRAGLNRDMAQAIRSVRAKPVRAEMMTVGGRTKSVVVIEWPAKDGGEAKEVEGEEVGALERALKAVVENRALVGYGMGPVVLGQKRARDYGSPSTSEVDSAFLLRNGNFC 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4485g00002 263 Gene3D - 38 101 IPR036638 GO:0046983
Mupr4485g00002 263 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Mupr4485g00002 263 Pfam Helix-loop-helix DNA-binding domain 47 94 IPR011598 GO:0046983
Mupr4485g00002 263 PANTHER TRANSCRIPTION FACTOR BHLH30 33 242 IPR045847 GO:0003700|GO:0006355
Mupr4485g00002 263 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 104 IPR036638 GO:0046983
Mupr4485g00002 263 SMART finulus 51 100 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4485g00002 Mupr-Chr4485 6109 7140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4485g00002 42 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 45.055 3.21e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr4485g00002 HLH 4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4485g00002 - - gmx:100816394 397.127