LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4475g00007	ATGAGTGGAGTGGGGATTGATTTTGGAAATGAGAGCTGTGTGATTGCTGCAGTGAAGCAACGTGGGATTGATGTTTTGCTGAATGATGAATCCACACGTGAAACCCCTTCTCTGGTGTGCTTTGGGGAGAAGCAAAGGTTTTTAGGCTCAGCTGGTGCTGCTTCTGCTCTCACACACCCCAAGTCCACAATATCTCAAGTGAAGAGACTAAGCCGGAGATTTGCAGACCCTGATGTTCAAAATGAGCTGAAAATGCTCCCCCTTGAAACTTCCAAAGGCCCGGATGGTGGCATTCTTATTCACTTGAATTACTTGAAGGAGACTCATGTCTTTACCCCGGTTCAAATAGCAGCAATGCTCTTTGCTCACTTGAAGACTATCGCCGAAAAAGATTTTGGGACCACTGTTTCTGACTGTGTTATTGGGGTTCCGTCGTACTTTACCAACTTGCAGAGACGAGCTTATCTCGATGCAGCAGCAATTGTTGGGTTGAAGCCTTCGATGTTGTTCCATGATTGCACTGCAACTGCTCTTAGTTATGGAGTTTACAAAACAGATTTTCCCAGTGCAGCTCCTATTTATGTTGCATTTGTTGACATAGGTCATTGTGATACTCAGGTCTCTATTGCAACATTTCAGGTTGGCCAAGTGAAGATTCTTTCACATGCTTTTGACAGGAGCTTAGGGGGGAGAGACTTTGATGAGGTTCTGTTTAGTCATTTTGCAGCAAAATTTAAGGAACAGTATAGCATTGACGTGTATTCTAATTCCAGGGCATGTAAGAGGTTGCGTGTAGCATGTGAGAAGCTGAAGAAGGTTTTGAGTGCGAATTTAGAGGCTGCTCTGAGCGTTGAGTGTTTGATGGATGAAAAAGATGTTAAGGGCTTTATCAAGAGGGGAGAATTTGAGAATCTGGCATCAGGATTATTGGAGAGAATTCATATTCCTTGCAACAAAGCGTTGGCTGATGCAGGCTTGACTATAGAAAAGATTAATTCTGTTGAGTTAGTTGGTTCAGGTTCAAGGATTCCAGCTATAACTAAAGTATTAACTTCTCTATTTAAGAGAGAACTCAGTCGCACGCTGAATGCAAGTGAGTGTGTAGCTCGCGGGTGTGCTCTGCAGTGTGCAATGCTCAGTCCTGTTTTCCTTGTCAAAGAATATGAGGATCGGATGATGTACTCTTCCAAAAAGCCAACCCATTCCCAGTGTTAA	1215	0.4346	MSGVGIDFGNESCVIAAVKQRGIDVLLNDESTRETPSLVCFGEKQRFLGSAGAASALTHPKSTISQVKRLSRRFADPDVQNELKMLPLETSKGPDGGILIHLNYLKETHVFTPVQIAAMLFAHLKTIAEKDFGTTVSDCVIGVPSYFTNLQRRAYLDAAAIVGLKPSMLFHDCTATALSYGVYKTDFPSAAPIYVAFVDIGHCDTQVSIATFQVGQVKILSHAFDRSLGGRDFDEVLFSHFAAKFKEQYSIDVYSNSRACKRLRVACEKLKKVLSANLEAALSVECLMDEKDVKGFIKRGEFENLASGLLERIHIPCNKALADAGLTIEKINSVELVGSGSRIPAITKVLTSLFKRELSRTLNASECVARGCALQCAMLSPVFLVKEYEDRMMYSSKKPTHSQC	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4475g00007	404	PANTHER	HSC70CB, ISOFORM G-RELATED	1	389	-	-
	Mupr4475g00007	404	Gene3D	Actin; Chain A, domain 4	229	312	-	-
	Mupr4475g00007	404	FunFam	Heat shock 70 kDa protein 4	1	79	-	-
	Mupr4475g00007	404	FunFam	Heat shock 70 kDa protein 4	107	193	-	-
	Mupr4475g00007	404	CDD	HSPA4_like_NDB	2	380	-	-
	Mupr4475g00007	404	Pfam	Hsp70 protein	4	387	IPR013126	GO:0005524\|GO:0140662
	Mupr4475g00007	404	Gene3D	-	5	373	-	-
	Mupr4475g00007	404	Gene3D	-	38	112	-	-
	Mupr4475g00007	404	PRINTS	70kDa heat shock protein signature	2	15	-	-
	Mupr4475g00007	404	PRINTS	70kDa heat shock protein signature	30	42	-	-
	Mupr4475g00007	404	PRINTS	70kDa heat shock protein signature	362	382	-	-
	Mupr4475g00007	404	PRINTS	70kDa heat shock protein signature	139	159	-	-
	Mupr4475g00007	404	PRINTS	70kDa heat shock protein signature	331	347	-	-
	Mupr4475g00007	404	SUPERFAMILY	Actin-like ATPase domain	3	184	IPR043129	-
	Mupr4475g00007	404	Gene3D	-	185	359	-	-
	Mupr4475g00007	404	FunFam	Heat shock 70 kDa protein 4	38	112	-	-
	Mupr4475g00007	404	SUPERFAMILY	Actin-like ATPase domain	192	380	IPR043129	-
	Mupr4475g00007	404	FunFam	Heat shock 70 kDa protein 4	229	312	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4475g00007	Mupr-Chr4475	62197	63461	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4475g00007	4	380	Calmodulin-binding Proteins	AT1G16030	35.263	4.75e-75	244

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4475g00007	K09489		-	gmx:100795914	672.93