Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4475g00001 ATGAGTGTTCCTCCGCCGCCGGCGATGTGGACGCCGTTCACGGCGGCGCAGTGGCACGAGCTGGAGCACCAGGCCCTCATCTTCAAGTACCTCAAGGCCGGTCTCTCAGTTCCCCCCGACCTGCTTCTCCCCATTCGCAAGAGCCTCCAATTGATGTCCCATCCCTCTCTGGGTTGTTACGGGAAGAAGATAGACCCCGAACCGGGTCGGTGCAGGAGAACCGACGGCAAGAAGTGGAGGTGCTCCAGGGATGCTCACCCTGACTCTAAGTACTGCGACCGCCATATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTCAATCTCACTCTCACTCTTCCTCCTCTTCTTCTTCTGCTGCTTCATCAAACCCTGTTGCTCCTGCTCCTTCTCCTGCTGCTGCTGCTGCTGCTGCTACCACCACTGCAACCCTTCACAGTCACACACTCCCCTTGCATACCAATGGTACTCGTGAAGCTTTCACTTTCACCCTCCCCCACCTTCACATGGACCCCCTCACTCTTCCAGGTGACAATACCAAGAAAACTTACAGGTTTGGACTGAACTCAGAAGCAGACGAGCATAATGTCTTACAGAAAGATCTGGGAAGTGTGAGGTATCAAGGTTATGACTTTACCTCGGATGGCATGTGGTCTCATATGTCTCAGATTCCATCAAATACTGTTTCGGAATCGAGAAGTGGTTCTACTATGCTTGGCAACTGCTTCCAACAGCAAACAATGCGAGATGCTGAGCTGTTGAACCTGGAAACTGCAAGGACCAAAGACCTCATCTTTAGTAGCCAGTTAAGTTCAGCAGGGAGTTTGAAACAGGAATATCAGTCCCCCCAGTCTCTCTTCAGTGACTGGGACTGGAAGAAGGATTTAAGTTCCTCTACCATCGAGTATAGACCCAACAAGGATTTTAACTGCAATCCAGATGTGAATGTTGATTCAAAT 966 0.5083 MSVPPPPAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQLMSHPSLGCYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESQSHSHSSSSSSSAASSNPVAPAPSPAAAAAAATTTATLHSHTLPLHTNGTREAFTFTLPHLHMDPLTLPGDNTKKTYRFGLNSEADEHNVLQKDLGSVRYQGYDFTSDGMWSHMSQIPSNTVSESRSGSTMLGNCFQQQTMRDAELLNLETARTKDLIFSSQLSSAGSLKQEYQSPQSLFSDWDWKKDLSSSTIEYRPNKDFNCNPDVNVDSN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4475g00001 322 MobiDBLite consensus disorder prediction 64 87 - -
Mupr4475g00001 322 MobiDBLite consensus disorder prediction 110 128 - -
Mupr4475g00001 322 ProSiteProfiles WRC domain profile. 65 109 IPR014977 -
Mupr4475g00001 322 PANTHER GROWTH-REGULATING FACTOR 5 12 299 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mupr4475g00001 322 Pfam WRC 66 108 IPR014977 -
Mupr4475g00001 322 MobiDBLite consensus disorder prediction 102 144 - -
Mupr4475g00001 322 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mupr4475g00001 322 MobiDBLite consensus disorder prediction 65 87 - -
Mupr4475g00001 322 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mupr4475g00001 322 Pfam QLQ 12 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4475g00001 Mupr-Chr4475 17056 19891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4475g00001 12 108 GRF Transcription Factor Family AT3G13960 60.550 7.00e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mupr4475g00001 WRC 2.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4475g00001 - - gmx:100809947 521.161