Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4473g00001 ATGGAGAAAATATGGTGGCGGGGATTGGATTTTAGGTTTCACGTGGTGTCCGAGTTTGATGATTCCAAGAGGAGTTGTAGGAGGAGATTGGCAGGTCACAACGAGAGAAGAAGAAAGAGCTCCCATGATTCTGTTGCAAGGAATTCTTCACAAGGAGGGTGTGCTCTCTCTCTTCTGTCATCTAGGAGTGATTCTTGGCTTTCTCCATCTGATCTCTCCACAAGATGCAGTGCTGCGTTGCGGGAATTGATAGCAGAGAACCGGGCAGCCATCATGGCCAGGCAGTTTGTTTCAGATAGAGATTGGCATATTCACCACCATGCAGTGGAAGACTTCAAGGAGATCCAACCTGAGTCCAATTACTTCCCACAACAGATGTTTCCCCAGACACAGTGA 396 0.4773 MEKIWWRGLDFRFHVVSEFDDSKRSCRRRLAGHNERRRKSSHDSVARNSSQGGCALSLLSSRSDSWLSPSDLSTRCSAALRELIAENRAAIMARQFVSDRDWHIHHHAVEDFKEIQPESNYFPQQMFPQTQ 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4473g00001 131 ProSiteProfiles Zinc finger SBP-type profile. 1 40 IPR004333 GO:0003677
Mupr4473g00001 131 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 12 75 IPR044817 GO:0003677
Mupr4473g00001 131 MobiDBLite consensus disorder prediction 30 51 - -
Mupr4473g00001 131 SUPERFAMILY SBT domain 12 45 IPR036893 GO:0003677|GO:0005634
Mupr4473g00001 131 Pfam SBP domain 12 39 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4473g00001 Mupr-Chr4473 1177 5074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4473g00001 12 43 SBP-box Gene Family AT2G33810 81.250 1.31e-12 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr4473g00001 SBP 2.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4473g00001 - - var:108327478 231.491