Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4455g00002 ATGGCTTTGAGGTTAATAGCGATTTCGGCGGTTTCTACAGTGTTGAGCTTTGTGGGCTTGCAGTTTTGCACAGACTTGCCTTTAGATAAACTTAAATCAGATGGACTAATTGGCTGGAATTTAATTCATTTGGACAATACCAGCCATGACATTGAATTGCCTTTGGGTTTGTACACCACCATAGGCCTACTGGTGAATTGCATGATCAATGTATTTATCCTTCTCAATCTTTGTCTCAAGGTGATTAATATACTTACTGTTTATGGGCCCTCTTATGACTTGCAGGCTATATTCTTCACGGAGTTATATGCTTCTGAAACTCGTAAACTGATTGAACGTCTCATTAATTATGTCATTTACAAGGGGACATTTCTACCACTGATTGTGCCACCAACAATTTATCAAGCTGGTCTTTGGTCAACTTGGTTGACTGTGCTTTGTTCTTTGAAGATGTTTCAAGCTTTGGCTAGAGATCGTCTGGAACGACTGAATGCATCTCCATCTGCTACACCCTGGACATATCTTCGTGTATATTCAGCATTGTTATTTGTTTTCATGGTTGATGTTCTCTGGTACTACTTGCTCTGTTTTTCTATAACAATATTCTTGTTTATATTATTACCTTGCCTTTATCATTATTACAATACTGGAGATTCCTCTATTTTCTACTCGGTCATAGTTTTTGCCCTGAGCACAGCCATTTTGGTACATGGATTTCAGTTGCTTGACATATGGATGCATCATTCAGCTTGCAATAGCAGTGATTTCCGAACGCCTAAACTGCTCAACACATTAACTGCAGGTTCATTGTTGGAATGGAAGGGATTTCTTATTCGGAACTTGGGGTTTTTCCTAGACATGGCAACATTTTTTATGGCACTTGGCCATTACTTGTATATATGGCGGCTTCATGGCATGGCTTTCCATCTTGTAGATGCAGTGCTATTTCTAAATATACGTGCATTGCTTAGTGCAATAATAAATCGCATAAAAGGCTTTATCAAGCTAAGGATAGCTCTAGGAGCACTTCATGCAGCTCTTTCTGATGCAACAACTGAGGAACTAACAGCATATGATGATGAATGTGCTATTTGTAGAGAACCCATGGCTAAGGCCAAAAAGCTAAACTGCAATCACCTCTTCCATCTTGCATGTTTGAGATCTTGGTTGGATCAAGGCCTGACTGATGTGTATACTTGTCCAACATGCCGAAAGCCACTTTTTGCTGGTGGGCCTGAAAATGAAACAAACTCCAATACGGGGGCAATATCTAGTGATGAGCAACTTGCACGCCAAATAAGTGCAGGATTAGATCGAACAAACTCTGCTAGACATAATGCTGCGCCTACAGGACTGTATCCAAATCAGCCGCTAAACACACCTGAAGGTGTTCCTTGGAGGGCTGCAGGGCTGGACTCAGGTTGGTTGCATTCTTGGCCAAATCAAGGTGTCGATGGGGCTGGTCCATCTACTGCTATCAGAACGGTTGGATTGGGAAGAGTTCAAATGATGATGAGGCATCTTGCATCTGTTGGAGAAACCTATGCACAGACAGCCTTTGAAGATGCTTCTTGGAATCTTTGGCCCATTAATCCTGCTCAGGCTTCTGCAAGTGGTTCAACCATTCCTCCCCCTGGTGGAAGAGTGCAGGGAGGAACTGGTAGTTTACATTTAAGGACTGCTTCACAGCCTTCAAATGATAATGTTGCAAATATACTTGCGATGGCTGAGACTGTTCGGGAGGTTCTACCTCATATTCCAGATGACATGATATTCCAGGACTTGCAAAGGACAAATTCGGTGACGGTTACTGTGAATAATCTTCTCCAAATGTGA 1836 0.4188 MALRLIAISAVSTVLSFVGLQFCTDLPLDKLKSDGLIGWNLIHLDNTSHDIELPLGLYTTIGLLVNCMINVFILLNLCLKVINILTVYGPSYDLQAIFFTELYASETRKLIERLINYVIYKGTFLPLIVPPTIYQAGLWSTWLTVLCSLKMFQALARDRLERLNASPSATPWTYLRVYSALLFVFMVDVLWYYLLCFSITIFLFILLPCLYHYYNTGDSSIFYSVIVFALSTAILVHGFQLLDIWMHHSACNSSDFRTPKLLNTLTAGSLLEWKGFLIRNLGFFLDMATFFMALGHYLYIWRLHGMAFHLVDAVLFLNIRALLSAIINRIKGFIKLRIALGALHAALSDATTEELTAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQGLTDVYTCPTCRKPLFAGGPENETNSNTGAISSDEQLARQISAGLDRTNSARHNAAPTGLYPNQPLNTPEGVPWRAAGLDSGWLHSWPNQGVDGAGPSTAIRTVGLGRVQMMMRHLASVGETYAQTAFEDASWNLWPINPAQASASGSTIPPPGGRVQGGTGSLHLRTASQPSNDNVANILAMAETVREVLPHIPDDMIFQDLQRTNSVTVTVNNLLQM 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4455g00002 611 CDD CUE_RIN3_plant 572 609 IPR035667 -
Mupr4455g00002 611 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF8 11 611 - -
Mupr4455g00002 611 ProSiteProfiles Zinc finger RING-type profile. 362 404 IPR001841 -
Mupr4455g00002 611 SMART ring_2 362 403 IPR001841 -
Mupr4455g00002 611 FunFam E3 ubiquitin protein ligase RIN2 335 414 - -
Mupr4455g00002 611 SUPERFAMILY RING/U-box 349 409 - -
Mupr4455g00002 611 Pfam Ring finger domain 360 404 IPR001841 -
Mupr4455g00002 611 Gene3D - 570 610 - -
Mupr4455g00002 611 FunFam E3 ubiquitin protein ligase RIN2 570 610 - -
Mupr4455g00002 611 CDD RING-H2_AMFR 360 407 - -
Mupr4455g00002 611 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 336 410 IPR013083 -
Mupr4455g00002 611 ProSiteProfiles CUE domain profile. 571 611 IPR003892 GO:0043130
Mupr4455g00002 611 Pfam CUE domain 575 611 IPR003892 GO:0043130
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4455g00002 57 447 C3H Transcription Factor Family AT3G16090 26.506 9.56e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4455g00002 K10636 - gmx:100820578 1013.06