Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4450g00004 ATGCGACCAACGTGGTTTGGAAGGAAGAGGCATGTCAATTCATTCGCTGTTAGGGTATCACTCAAATCTGGAAAGAAATTTGTCAAACATTCTATGATTCAGAACGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTTTCATGGGGTCAAAGGTAGAAGAATTCTCTGATGAAAACTGTCGCTTAGGGGAGGCTAATCAGCATTGTACTGATGAGGGTGATGGATCTTCTCTTAGGAGCAGAGCTTGTGAAAGATCGAAGCATGCTGTCAGTGAAACCAGTCACATGGCTAGTGTTTCTTCCACTCATGATTCTCTATCTGAAAATGCTGAGAATAGACGAGCCTTGTCAGAGAAGTATCAGGATTCCAAGTGTTTAGAAAGTCTTGATGATAGCACTTCTTGTATCAGTAGGACCAGTAATGTTAGTCACTTAGGGGCTGAAGGATCTGGAAATGGGCCATCTGTTGGCATATCTGGTTTGTCAGAATGCTGTATGGAAAATGTTGATTCATCATTAAACAAAGAGGGAGTACCTATTATTGTTCCTGGTGAAAAATCTCTATTCGATAAGGAAAACCTAATTAACGGCACAGCCATGGTTTCAATAGAAATATGTCCAAAGTCAGAAGCAGATACTGAAAATAATGTTGATGTTGCTAAAGATGAAGATCATAAATATTCAGACAATGATGGACTGAATGAGAAGGTTGAGGAGCTGGCTAAATTGCCTGGCAGGGCGGAACCTCAATTAGAAAATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGATATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGCAGGTGCAGTGATGGCGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAGGTCCCTGAAGGGGACTGGTTATGTGAAGAATGCAAGTATGTAGAGGAGACTGCAAATCGAAGGCTAGATATTGAAGAAAAAAAAGTTCATAAAGTTAGTTCAACTTCACAAATTTCTGGCAAAAGACCTTCTGAAAGCATGGAAGTAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCGAGCACAGGATCACCGAAGGCATCAAGCCCCAAGAGACTAGTTCCACTGTCAAGAGAATCTTCATTCAAGAACGTAGATAATAAAGGAAAAATGAAGTCTGGTCAACAGATCCCTGTGCGCAACCACCTTGGTGTGGATGACATAGAACTTACCCGTTATCTTTCTACTGGCCCTCGGAGTCAAAATGCAAAGAGTACATTGTTGAAGTCTAATTCATTCAACAACTTCAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGCTCCCCAAAAGCAGAAAGGGGTCGAACATATTTCTAAGAATATGGAGACACCTTCTGGGATGATAAGCAAATCAATGTCATTCAAATCCTCAAATTTGGGCCGTTCAAGTGCTATTGAGTCAAAAGTTAAAATGATTTCTTCTAAGCCTGGAACTGCTCAGGATTTGAAGGCATCAAGACATGCAAAAGAATCAGGTTCATTTGACAGGAAATTTCTGTCTAAGATTGATCGACCTGTTATTTGTTCAACGATGGTTAGTTCTGTTGTTTCCACATCAAAGGGTGATCAGAAGCTTACACCACATGGTGAAACTGCAAAACCTTCTACAGTTAACAACAATCGAGAGTTTAAGGTCAATCAAGATGGAAAATTATATTCATTATCAAAATCTATGAATAATACAAGCAGTAAAAGTCCAGAACCTCAAGTTAGTTCAGACAGAACATCAACCAGTGTCGATGAAACTGAACAGGATAGGTTGCCTCGATCACAGGAGACAGCTAATCAGGTTGACAAAACCAAAGATAGTTCTAGTGATCATGTGAGGTCAGGTGTTACTAGTTCTTCAAAAAGCCCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCACGATTAGTGGTACACAGGAATTTGGTGCTGAAGCATCAGTCACTGCCACAAGTAGTTCAAAAGAGGAGTTGCTCAAGGGAAATAGACTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAAGAAAGAAGCTCCTGATCAAAGTAATGAGTTTCCTACATCAAACACTGGTTTGAAACGTGAAGTCACTTCTCAAAACCAAGTTTTGGTTTCCAACACAATGAAGAATGGTATATCTGATGAAGAAACCAATATGAAGCAGGAAATCATTGAGAATTCTACATTTGAAACCTCCAAATGTCCATCTGCCAATGATCTGAAGCAACTTAAATTTTGTCAAACTGATTCTTGCTCTCAGCTGAGAAAGTCAGATTCTGTTGGTCCCACTTCAGGAAAACTTGTAGTGAGAGACTTGCCCAATAATGCCTTGGCAATCTCAAGTGTTCTTTCAAAGATGTCAGTCATTCCAGAATATGAGTACATCTGGCAGGGTGTCTTTAAAGTGCATAGAAATGGAAAGCCTCCCGACTTGTATACTGGAATTCAAGCACATTTATCTGCATGTGCTTCCCCTAAGGTTCTTGAGGCAGTGAAGAAATTTTTACCTGAAGTTTCCCTAAATGAAGTTTCTCGTTTGAGCACATGGCCTTCACAATTTCATCAAGGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGGCAAGAATATGAATATCACGCTTTTATTGACAGCAGGCTTTGA 2799 0.4037 MRPTWFGRKRHVNSFAVRVSLKSGKKFVKHSMIQNADMRLESGTCNVCSAPCSSCMHLNRAFMGSKVEEFSDENCRLGEANQHCTDEGDGSSLRSRACERSKHAVSETSHMASVSSTHDSLSENAENRRALSEKYQDSKCLESLDDSTSCISRTSNVSHLGAEGSGNGPSVGISGLSECCMENVDSSLNKEGVPIIVPGEKSLFDKENLINGTAMVSIEICPKSEADTENNVDVAKDEDHKYSDNDGLNEKVEELAKLPGRAEPQLENESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYVEETANRRLDIEEKKVHKVSSTSQISGKRPSESMEVATAAKRQALESSTGSPKASSPKRLVPLSRESSFKNVDNKGKMKSGQQIPVRNHLGVDDIELTRYLSTGPRSQNAKSTLLKSNSFNNFNSKPRVKLVDEVAPQKQKGVEHISKNMETPSGMISKSMSFKSSNLGRSSAIESKVKMISSKPGTAQDLKASRHAKESGSFDRKFLSKIDRPVICSTMVSSVVSTSKGDQKLTPHGETAKPSTVNNNREFKVNQDGKLYSLSKSMNNTSSKSPEPQVSSDRTSTSVDETEQDRLPRSQETANQVDKTKDSSSDHVRSGVTSSSKSPFCRKCKDFGHATECCTISGTQEFGAEASVTATSSSKEELLKGNRLKAAIQAALLRRPEIHKKKEAPDQSNEFPTSNTGLKREVTSQNQVLVSNTMKNGISDEETNMKQEIIENSTFETSKCPSANDLKQLKFCQTDSCSQLRKSDSVGPTSGKLVVRDLPNNALAISSVLSKMSVIPEYEYIWQGVFKVHRNGKPPDLYTGIQAHLSACASPKVLEAVKKFLPEVSLNEVSRLSTWPSQFHQGGAKEDNIALYFFAKDIERQEYEYHAFIDSRL 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4450g00004 932 MobiDBLite consensus disorder prediction 104 128 - -
Mupr4450g00004 932 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 215 342 IPR013083 -
Mupr4450g00004 932 MobiDBLite consensus disorder prediction 554 616 - -
Mupr4450g00004 932 MobiDBLite consensus disorder prediction 512 532 - -
Mupr4450g00004 932 MobiDBLite consensus disorder prediction 345 412 - -
Mupr4450g00004 932 ProSiteProfiles Zinc finger PHD-type profile. 280 331 IPR019787 -
Mupr4450g00004 932 PANTHER - 280 926 - -
Mupr4450g00004 932 MobiDBLite consensus disorder prediction 107 121 - -
Mupr4450g00004 932 SMART PHD_3 282 329 IPR001965 -
Mupr4450g00004 932 MobiDBLite consensus disorder prediction 554 658 - -
Mupr4450g00004 932 SUPERFAMILY FYVE/PHD zinc finger 269 331 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4450g00004 Mupr-Chr4450 20845 26587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4450g00004 279 366 C2H2 Transcription Factor Family AT3G01460 30.682 7.12e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4450g00004 - - gmx:100781187 1510.74