Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4450g00002 ATGTCAAACACCTCGCAGGTTATTACATGCAAAGCTGCGATATGCTGGGGGGCAGGAAAGGCTGTGACGGTGGAAGAGATACAAGTAGATCCACCAAAAGCAACAGAAGTTCGAGTTAAGATGCTATGTGCGAGTATATGCCACACAGACATCTCAAGCATTCAAGGATTCTCATTTGCCAGTTTTCCTCTAGCACTTGGACACGAAGGAGTTGGTGTTGTAGAGAGTGTTGGTGATCAAGTAACAAATTTGAAAGAAGGGGATATAGTAATTCCAACATACATAGGGGAGTGTCAAGAATGTGAGAACTGTGTTTCAGGAAAAACGAATTTGTGTCTGACATTCCCTATGAGATTGACTGGCCTAATGCCAGATAACACTTCAAGGATGTCCGTACGAGGCCAGAGGTTACACCATGTTTTAAGTTGTGCTACATGGTCAGAGTACATGGTTAGTGATGCCAACTACACTCTCAAACTTGATCCAACCATTGATCTGGTCCATGCCAGTTTCATCTCATGTGGGTTTTCAACTGGCTTTGGAGCTGCTTGGAAGGAAGCCAAGGTTGAAAGTGGATCCAGTGTAGCTGTTTTTGGTCTTGGGGCTGTTGGATTAGGGGCTATAAGCGGAGCCAAAATGCTGGGAGCAACTAAGATAATTGGAATTGACAAAAATGAGATGAAGAGAGAAAAAGGAGAGGCTTTTGGCATGACTGACTTTATAAACCCTGGTGATTCTGCTAAATCTGTTTCAGAATTGGTTAAGGAACTGATTGGTGGGATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTGCCCCTTTACTTACTGAATCTGTGGAAGCCACAAAAGTGGGAACGGGCAAAACAATAGCAATTGGTTCAGGAACAGAACTTATTATCCCATTTAGTCTTCTTTCCATTATGTATGGTAGAACTTTGAAAGGTTCTATTTTTGGGGGGCTAAAAGCCATAACGGACCTGTCCATCGTAGCTAACAAGTGCCAGAAAGTGGAATTCCCTCTTCAAGAACTGTTCACCCACGAGGTCCCATTGGTAGATATAAACAAAGCATTTGAGCTATTGAAACACCCCAATTGTGTGAAAGTTGTCATCAACATGTCACATTGA 1131 0.4297 MSNTSQVITCKAAICWGAGKAVTVEEIQVDPPKATEVRVKMLCASICHTDISSIQGFSFASFPLALGHEGVGVVESVGDQVTNLKEGDIVIPTYIGECQECENCVSGKTNLCLTFPMRLTGLMPDNTSRMSVRGQRLHHVLSCATWSEYMVSDANYTLKLDPTIDLVHASFISCGFSTGFGAAWKEAKVESGSSVAVFGLGAVGLGAISGAKMLGATKIIGIDKNEMKREKGEAFGMTDFINPGDSAKSVSELVKELIGGMGVDYSFECTGVAPLLTESVEATKVGTGKTIAIGSGTELIIPFSLLSIMYGRTLKGSIFGGLKAITDLSIVANKCQKVEFPLQELFTHEVPLVDINKAFELLKHPNCVKVVINMSH 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4450g00002 376 CDD liver_alcohol_DH_like 8 372 - -
Mupr4450g00002 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Mupr4450g00002 376 Gene3D - 179 317 - -
Mupr4450g00002 376 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Mupr4450g00002 376 Pfam Alcohol dehydrogenase GroES-like domain 35 159 IPR013154 -
Mupr4450g00002 376 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 317 - -
Mupr4450g00002 376 SUPERFAMILY GroES-like 4 190 IPR011032 -
Mupr4450g00002 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 332 IPR036291 -
Mupr4450g00002 376 PANTHER ALCOHOL DEHYDROGENASE 6 366 - -
Mupr4450g00002 376 Gene3D - 14 369 - -
Mupr4450g00002 376 Pfam Zinc-binding dehydrogenase 202 321 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4450g00002 Mupr-Chr4450 7944 9967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4450g00002 35 362 Monolignol Biosynthesis Gene Families AT2G21730 27.463 3.59e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4450g00002 K00121 - gmx:100798341 670.233