Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4432g00002 ATGAAACTCAAGGAGAAGTGTCTCAAGCCTGAACTAAAAAAGGCTTGCAATTCTAAGAGGGGGGTGGTGCTGAATTCCACCAAGTTTTCAAAGGATGATATGACTCAAGAACCTTTAGTTAATAAGGTGGTTGATTCATCTCTTAGTGATTCTGAAGGTGTAGGTGATGAGAATAGAAAGGGAGAAGCAAAGACTTTCTCATGCACCTATTGCAAGAGAGAGTTTTCTACCTCACAAGCTTTGGGAGGACACCAAAATGCACACAAACAAGAGCGTGCACTTGCAAAGCGTCATCAAGGCTTTGATGCCGGTGGTTTTGGATACTTTCCTTATTACTCATATCCAAATTTTTATAACTCTCATTCCCTTTATGGAGGATCCTTCAATAAGGCACTTGGAGTCCGAACAGAGTCCATGATTCACAAGCATCCTTGGACTCCACAGTATGATCATACTTGGTTAAGGCGGGATCATAGGATACCAAATAAGTCAATATTTGATGAGTTTGAAATTATGAAAAGTGATGCAACTCTAATGCCGAGGGATGATGATAATGGCAATGCCAATGGTAGAACACTCTCTCTTTTTCCAAATTCTGCTACCAATTCATTAACCCATCTCGTAAACACAACAACTCTTGCAACAAAAATTGATGATGATTCCATGCCAGAAGAAACATCCAAAGGAGCATCTTGCAATCTTGATTTGTCACTTAAGCTTTAG 723 0.3983 MKLKEKCLKPELKKACNSKRGVVLNSTKFSKDDMTQEPLVNKVVDSSLSDSEGVGDENRKGEAKTFSCTYCKREFSTSQALGGHQNAHKQERALAKRHQGFDAGGFGYFPYYSYPNFYNSHSLYGGSFNKALGVRTESMIHKHPWTPQYDHTWLRRDHRIPNKSIFDEFEIMKSDATLMPRDDDNGNANGRTLSLFPNSATNSLTHLVNTTTLATKIDDDSMPEETSKGASCNLDLSLKL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4432g00002 240 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 9 240 IPR044246 GO:0009788
Mupr4432g00002 240 Gene3D Classic Zinc Finger 47 102 - -
Mupr4432g00002 240 Pfam C2H2-type zinc finger 66 90 - -
Mupr4432g00002 240 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Mupr4432g00002 240 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Mupr4432g00002 240 SUPERFAMILY beta-beta-alpha zinc fingers 63 93 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4432g00002 Mupr-Chr4432 23442 24164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4432g00002 62 142 C2H2 Transcription Factor Family AT5G10970 51.220 1.01e-16 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4432g00002 zf-C2H2_6 1.9e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4432g00002 - - gmx:102659582 281.567