Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr442g00003 ATGGAGAGTGGGAATGAGGGAATGGGAGGGTCGAATGGTGTTGGAGGAACTTCGCGCTGGAACCCTACAAAAGAGCAAATAAGCATGCTAGAGAATCTGTATAAGCAGGGAATAAAGACTCCAAGTGCTGAGGAGATACAGCAGATAACTGCTAGGCTTAGGGCGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAATCACAAAGCCAGGCAAAGACAGAAGCAGAAGCAAGAAACCATCACTTTTTTCAATCGCTTCCTTCATACGCCTCAGCCCTTTTTTTCTCCGCCAATTTGCCCAAATATTCATGGCATCTACGCCCCATATTGCATAGGTCAGGCAGAGAGTGAAATTGGGTTTTATCCCCCACACCCGAAGGTGGTTGTACCCGTAGGTTTTAAGAGGAATCCATCTGAGAAAGTTGTGGGCACAGGCATGTCAAACTCAAACATGATCTGTAATGGTCCCTTGGTATACGAAGGCATGCAAATGCAACAGAGAATCTCGGATTGTAACTTGAGCTACAGTAACCAAGAAACGTTGGATCTCTTTCCTCTGCACCCAACTGGCATTTTGGAAGGAAAAACAACAACAGACCAGGTGTCTTCTGCTGATAGTTCCACTGATACACCTTCTGCTTCTCCTGATATCAATCAAGACCATGGTTCTCCGCTAAACCAACCCTTCTTTGATTTTTTTACTACTTCTGGACAAGCTCCTTAA 735 0.449 MESGNEGMGGSNGVGGTSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQETITFFNRFLHTPQPFFSPPICPNIHGIYAPYCIGQAESEIGFYPPHPKVVVPVGFKRNPSEKVVGTGMSNSNMICNGPLVYEGMQMQQRISDCNLSYSNQETLDLFPLHPTGILEGKTTTDQVSSADSSTDTPSASPDINQDHGSPLNQPFFDFFTTSGQAP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr442g00003 244 Gene3D - 17 85 - -
Mupr442g00003 244 MobiDBLite consensus disorder prediction 1 21 - -
Mupr442g00003 244 SUPERFAMILY Homeodomain-like 17 84 IPR009057 -
Mupr442g00003 244 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 223 IPR044555 GO:0003700|GO:0099402
Mupr442g00003 244 Pfam Homeodomain 18 77 IPR001356 GO:0003677
Mupr442g00003 244 CDD homeodomain 19 79 IPR001356 GO:0003677
Mupr442g00003 244 MobiDBLite consensus disorder prediction 196 244 - -
Mupr442g00003 244 SMART HOX_1 15 82 IPR001356 GO:0003677
Mupr442g00003 244 FunFam WUSCHEL-related homeobox 4 17 84 - -
Mupr442g00003 244 ProSiteProfiles 'Homeobox' domain profile. 13 78 IPR001356 GO:0003677
Mupr442g00003 244 MobiDBLite consensus disorder prediction 197 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr442g00003 Mupr-Chr442 44090 45179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr442g00003 13 238 Wox Gene Family AT5G59340 42.105 6.10e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mupr442g00003 Homeodomain 4.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr442g00003 - - pvu:PHAVU_011G064900g 364.77