Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4425g00009 ATGACAATCATAAGAGAAAGCAGCAGCTACGCTTACCCTAGCCTCCTCTTCCGCTCTACCAATTTCAGGATGGAATCTCAGGTGAAGCATGCTATTGTCGTCAAAGTTATTGGTCGTACTGGATCTAGAGGGCAGGTGACTCAGGTTAGAGTGAAGTTTTTGGATGATCAAAATCGACACATTATGAGGAACGTGAAAGGACCAGTGAGAGAAGGAGACATTCTCACCCTACTTGAATCCGAAAGAGAAGCAAGGAGAAAATAA 264 0.4394 MTIIRESSSYAYPSLLFRSTNFRMESQVKHAIVVKVIGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESEREARRK 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4425g00009 87 PANTHER 40S RIBOSOMAL PROTEIN S28 24 87 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mupr4425g00009 87 FunFam 40S ribosomal protein S28 22 87 - -
Mupr4425g00009 87 CDD S1_S28E 29 86 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mupr4425g00009 87 SUPERFAMILY Nucleic acid-binding proteins 24 86 IPR012340 -
Mupr4425g00009 87 Gene3D - 21 87 IPR012340 -
Mupr4425g00009 87 Pfam Ribosomal protein S28e 27 86 IPR000289 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4425g00009 Mupr-Chr4425 60644 63544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4425g00009 24 86 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 85.714 9.92e-34 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4425g00009 K02979 - qsa:O6P43_005779 122.864