LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4414g00001	ATGCCTTCGAGACCTTTCCCTCCCACAAATCCCACCAAAACCAACGCCCTCTTCCTAGCACTCACCATTTCAGCTTGTGTTGTGATTTTCTGCTCAATCCTCTACTTCCTCTACCATCTGTGGCATTCCCTTGTTCACAGAGCCAAGACCATCCCCTTTGATGCAAGTGCACCCTTGAAGCTCCAAAGATTCTCATACAAAGACTTAAAGCAAGCCACAAATGGCTTTGACAGTGCCAATGTCATTGGCAAAGGTGGTTCTGGCACTGTTTTCAGGGGAATACTTAAAGATGGCAAGTTGATTGCCATAAAGCGCCTGGACGCCTTGTCTTTGCAGTCAGAGAGGGAGTTTCAGAACGAGCTGCAGATTCTTGGAGGGTTAAGGTCACCATTCTTGGTGACCCTTTTGGGATACTGTGTGGAAAAGAACAAAAGAGTGTTGGTGTATGAGTACATGCCTAACAGAAGCTTGCAGGAGTCCCTTTTTGGAGAAGGAGGTTTGAGTTTGAGTTGGGAGAGCAGGTTTTGCATAATATTGGATATTGCTAGAGCTTTGGAGTTCTTGCACCTTGGATGTGATCCACCAGTGATCCATGGTGATATCAAGCCAAGCAATGTTCTGCTTGATACTGAGTGGCGTGGGAAGATCTCTGACTTTGGCTTGTCAAGGATTAAGGTGGAGGGTGAGTTTGGTGTGGACTTGTTTAGCCAGGACCTTGGGAGGAGCCAGGATCTATGGAAAAGCCAAGACCTTTCAGGTAATTTGACTGCTGAAACTCCTGCTATTGGTACTCCAGTTGAGAGTGTCAGTGAAGTAGATTTTGCTCTAGCTTTGCAAGCCTCTTCTTCGTCCAAAAATAGTAGGACCTGCTTTAATGTTAAAGCTTTGAACTTGAATTCTTTGAATTATAATGCCAATATTGCCGGTGAAAGTGAAATTAGAAGTGTAAATGCAAAGGGCAAGGAAATTTCAGCTTTGGATAAGGATGATTGGAATGGTAAGTTTTTTCCTTATGATGATGAGCTTTCTAGCATTGATTATAGTAAGGAGTTAACTGTTAATGCTTCTCCTTTGGTGGATGATGAGAAGGCGAATGGGAAACAATGGGGAAAGGACTGGTGGTGGAAACAGGATGGAAGTGGAGAGTTATGTAGTAAAGACTATGTTATGGAGTGGATTGGGAGTCAGATTTGTCCCTCCAACCCTGATTGGGATGATGGTAAGAACAATGTTCACGACAAAGTAGAGTTGGAAAATTCAAGTCCCAAGGATAAAGAGCATGATGCTATTGCACCCCAACCACAGGTTTTTGGGATAGGACATCCTACAGAAAATGAAGTTGAGAAAAAAGAGTCAAGGGGAAAGAAAAATCACAAGAAGAAGCCCAGGAAGATGCAAGAGTGGTGGAGAGAAGAGCATCTTGCTGAACTAAGCAAGAAGACAAACAAACTGAAAAATCTTCATACTAAATGGAAGAAAGGACTGAAAGTGCCCCATTTTGATTTGGGTAGAAGATTTTATATATGCAGGCGTAACAAGTTTGGAGAGGAGGATGAGAATGAGTTTGATCAAAATGGGGAATTTAGCTTCAGAAGAGGGTGGAAGAAGAAAAGTAGTCGTTCCATTGGAAGTGAGATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTGAGCAGCACAACTAGCATGAGAGGGACACTGTGTTATGTGGCACCAGAATATGGAGGTTGTGGGTTCTTAATGGAGAAAGCTGACATTTATAGTTTTGGAGTTTTGATTCTTGTAATTGTGTCAGGTAGAAGACCATTGCATGTTCTCGCATCACCTATGAAGCTAGAGAAAGCTAACTTAATAAGCTGGTGTAGACACTTGGCTCAAGCTGGTAACATTTTAGAACTAGTGGATGAGAGATTCAAACAAGATTACAACAAGGACCAAGCAAGCCTGTGTATCAATTTGGCACTCATTTGCCTAGGCAAAATTCCAGAGTTGCGCCCAGATATTGGAGACATTGTTAAGATTTTGAAGGGGGAGATGGACCTTCCACCTCTTCCATTTCAGTTCTCCCCTTCTCCACCTTCCAAATTATACACCAGACCAAGGACAAAACATAAGGCCACTGCAGAATAG	2127	0.4311	MPSRPFPPTNPTKTNALFLALTISACVVIFCSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNGFDSANVIGKGGSGTVFRGILKDGKLIAIKRLDALSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRVLVYEYMPNRSLQESLFGEGGLSLSWESRFCIILDIARALEFLHLGCDPPVIHGDIKPSNVLLDTEWRGKISDFGLSRIKVEGEFGVDLFSQDLGRSQDLWKSQDLSGNLTAETPAIGTPVESVSEVDFALALQASSSSKNSRTCFNVKALNLNSLNYNANIAGESEIRSVNAKGKEISALDKDDWNGKFFPYDDELSSIDYSKELTVNASPLVDDEKANGKQWGKDWWWKQDGSGELCSKDYVMEWIGSQICPSNPDWDDGKNNVHDKVELENSSPKDKEHDAIAPQPQVFGIGHPTENEVEKKESRGKKNHKKKPRKMQEWWREEHLAELSKKTNKLKNLHTKWKKGLKVPHFDLGRRFYICRRNKFGEEDENEFDQNGEFSFRRGWKKKSSRSIGSEMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGNILELVDERFKQDYNKDQASLCINLALICLGKIPELRPDIGDIVKILKGEMDLPPLPFQFSPSPPSKLYTRPRTKHKATAE	708

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4414g00001	708	ProSiteProfiles	Protein kinase domain profile.	76	683	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr4414g00001	708	FunFam	Receptor-like serine/threonine-protein kinase At4g25390	45	151	-	-
	Mupr4414g00001	708	PANTHER	OS07G0586332 PROTEIN	10	703	IPR044576	-
	Mupr4414g00001	708	Gene3D	Phosphorylase Kinase; domain 1	43	151	-	-
	Mupr4414g00001	708	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	196	208	IPR008271	GO:0004672\|GO:0006468
	Mupr4414g00001	708	Pfam	Protein kinase domain	79	226	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr4414g00001	708	Coils	Coil	470	490	-	-
	Mupr4414g00001	708	Coils	Coil	704	708	-	-
	Mupr4414g00001	708	FunFam	putative receptor-like protein kinase At1g80870	152	263	-	-
	Mupr4414g00001	708	MobiDBLite	consensus disorder prediction	687	708	-	-
	Mupr4414g00001	708	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	26	-	-
	Mupr4414g00001	708	ProSitePatterns	Protein kinases ATP-binding region signature.	82	104	IPR017441	GO:0005524
	Mupr4414g00001	708	FunFam	Receptor-like serine/threonine-protein kinase At4g25390	531	680	-	-
	Mupr4414g00001	708	SUPERFAMILY	Protein kinase-like (PK-like)	56	695	IPR011009	-
	Mupr4414g00001	708	SMART	serkin_6	76	673	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr4414g00001	708	MobiDBLite	consensus disorder prediction	435	467	-	-
	Mupr4414g00001	708	Gene3D	Transferase(Phosphotransferase) domain 1	533	680	-	-
	Mupr4414g00001	708	Gene3D	Transferase(Phosphotransferase) domain 1	152	262	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4414g00001	Mupr-Chr4414	2267	4393	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4414g00001	542	674	Receptor kinase-like Gene Family	AT3G58690	29.104	9.81e-12	65.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-XI	Mupr4414g00001		Pkinase	8.5e-28	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4414g00001	-		-	gmx:100800845	1295.03