Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4411g00001 ATGGGAAGGGCTCCTTGCTGCGACAAAGCCAACGTCAAGAGAGGTCCATGGTCGCCTGAAGAAGACGCCAAACTCAAATCTTACATCGAAGAAAACGGCACTGGTGGCAACTGGATAGCCCTGCCCCAGAAAATAGGCCTCAAAAGGTGTGGGAAAAGCTGTCGCCTCAGATGGCTTAACTATCTTCGCCCAAACATCAAGCATGGGGGTTTCTCCGAAGAAGAGGACAACATAATCTGCAGCCTCTATGTTAACATTGGAAGCAGGTGGTCTATTATAGCGGCACAATTACCCGGGCGCACCGATAATGATATAAAGAACTATTGGAACACTAAGCTGAAGAAGAAACTACTAGGCAAGCAAAGGAAGGAGCAACAAGCTCAAGCTCGTCGAGTTTGTAGCCTAAAGCAAGAGATCAAGAGAGAGAGTGAAGATTTGATGTTACCTGTGGGAGTTATTACCCAAACTCCCTATTGGACTGAACAGCCAATTCCAGTGGCAAATGTTTCCACCCAATACTCTGATCTCAACAATCAAACATCATTCATCAAACACTTCCCCAACAACATAGTCACTGCCACCATGAACTCACAACACTCATCATGTGGCATTTCCTTAACACAAGATCAGTTATATCCATCCACAATGAACATGATAACCAAAGAAGGGGTGGTGAGTGTTGCAAATGATAGTGGCACGTGTCATACATCAAACTTGTTTCAAGGGTTTGGGAACTTCCCCGGTGATTTGGCCTGTGTGAACTCACAACAAATAGATGGATCAATGCGGGTTTTTTATGGATTGGAGTCCATGGACATGGCTAATGGTAGCACAAACACGACTTCAACGGAAAGCACTAGTTGGGCAGATATAAGCTCTTTGGTATACTCACCTTTGGTTAACTCTGACTACGAAGGTTGCCAACAAAGAATGCCTCAAGATGTTACTTTTGAGGAGTCTAGTTACTTTGCGATGCAAACGCAATAA 987 0.4458 MGRAPCCDKANVKRGPWSPEEDAKLKSYIEENGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGKQRKEQQAQARRVCSLKQEIKRESEDLMLPVGVITQTPYWTEQPIPVANVSTQYSDLNNQTSFIKHFPNNIVTATMNSQHSSCGISLTQDQLYPSTMNMITKEGVVSVANDSGTCHTSNLFQGFGNFPGDLACVNSQQIDGSMRVFYGLESMDMANGSTNTTSTESTSWADISSLVYSPLVNSDYEGCQQRMPQDVTFEESSYFAMQTQ 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4411g00001 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mupr4411g00001 328 SMART sant 13 64 IPR001005 -
Mupr4411g00001 328 SMART sant 67 115 IPR001005 -
Mupr4411g00001 328 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mupr4411g00001 328 CDD SANT 71 111 IPR001005 -
Mupr4411g00001 328 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mupr4411g00001 328 CDD SANT 16 62 IPR001005 -
Mupr4411g00001 328 Gene3D - 7 68 - -
Mupr4411g00001 328 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mupr4411g00001 328 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mupr4411g00001 328 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mupr4411g00001 328 FunFam Transcription factor RAX3 70 145 - -
Mupr4411g00001 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mupr4411g00001 328 FunFam Transcription factor RAX3 7 68 - -
Mupr4411g00001 328 PANTHER OS09G0431300 PROTEIN 1 244 - -
Mupr4411g00001 328 Gene3D - 70 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4411g00001 Mupr-Chr4411 2528 4143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4411g00001 1 297 MYB Transcription Factor Family AT3G49690 48.338 6.71e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr4411g00001 Myb_DNA-binding 1.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4411g00001 K09422 - gmx:100792374 493.812