Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4407g00007 ATGGCACATCTGGAGTGTAATCTAAGGGGCCCCGGGAGTGGTAGTTCTCAACCGGAAAAAGGTTTGAAGGACGATGATCTGTATAGAGAGCTATGGAAGTTGTGTGCAGGGCCGTTGGTGGATGTTCCTCGTACTGGGGACAGAGTTTTCTACTTCCCTCAGGGTCACATGGAACAATTGCAAGCATCTACGGATCAGGAATTGAACCAGGAAATTCCTCATTTCAATCTCCCGTCCAAGATTTTTTGCCGTGTTGTGAACATTCAGTTGTTGGCGGAACAAGACACTGATGAGGTTTATGCTTGCATCGCTTTGCTTCCAGAATCAGATCAAACTGAGCCTGCAAATCCTGATCCAAGTGTTTCTGAGGCTCCAAAACAGAAGTTTCACTCATTTTGCAAGATATTAACAGCCTCTGATACTAGCACACATGGAGGGTTTTCGGTTTTGCGGAAGCATGCTACTGAGTGTCTGCCTCCATTGGACATGACCCAGGCAACCCCAACACAAGAGTTGGCAGCAAAGGATCTTCATGGATTTGAGTGGAAGTTTAAGCACATATATAGGGGACAACCAAGGAGGCACTTGCTTACAACTGGCTGGAGTACATTTGTTGCTTCTAAAAGATTGGTTGCTGGGGATGCTTTTGTGTTTCTAAGAGGAGAGCATGGCCAATTGAGAGTTGGTGTTCGGCGTTTAGCGCGGCAGCAGAGTCCTATGCCTTCCTCTGTGATATCAAGCCAGAGCATGCATCTCGGTGTGCTTGCCACAGCTTCCCATGCTGTTATGACTCGTACCATGTTTTTGGTTTATTACAAGCCAAGGACTAGCCAGTTTATTGTTGGTTTGAACAAATATCTTGAGGCAGTGAACAATAAGTTTTTAGTTGGCATGCGATTCAAGATGAGATTTGAGGGAGATGACTCACCTGAGAGAAGGTTTTCTGGTACTATTGTTGGGGCCGGGGACGTGTCTCCAGGATGGTCTAATTCTCAGTGGCGCTCATTGAAGGTTCAATGGGATGAACCAGCAACAATTCCAAGGCCAGAGAGAGTTTCTTGCTGGGAGATAGAGCCTTTTGTAGCTTCCACTGCTTTGAATGTCACTCAACCAGCAGTGAAGGGAAAAAGGTCTAGGCCTGCTGATGTTTCATCTTCTGGTGGGAGACTTGTCCTAACTGCTTCAGGTTTCTGGTACCATGGTTCTTCCCATTCTCATGAGCTTACTCAATTAGGTGCTGCTACTGCTGAAGTCCAAAGCAAGGAAAATCAGGTTGTTGCATGCTCTCTGAGGCAGAAAGACATTAATAGTAACAATCCTATTAATGCTAATAACTCCAGCAGCAGCTCTAGAGTCCGGGTGGAAGGAGTATGGTCTTCACCGCATTTGAATGTGACTTCTAACCTCTTTTCTGATCCCAACAACAACAATGGCACTTCGGCACTATCATCAATCTCGACTTATCCTAATGTTCCATCCAAATCAAGTGATGGCCCCACATGTGACCGAGTGGAAGATGGGAAAAAGACTGAGAATCCTCTTGATTGCTGGTTATTTGGAGTTAATTTGAGTAACAATTGTAGCAATGTTATTAGTCCTTCTTCAGAGAGAGAAGTGAGAGGTCCAAGCTCAAGCATTGTTCCTAGTGGTCCCAAAGAATCTATTCCTGCAGCTGCATGTGAAACTGAGAGGGTTCAGAGTCCCAACTATTCACTGTCCAACAAGGGGCAGAAGCAAATTATTTCTGAGGCATCACCAATTGAGTGGCAGAACAAGCAGGCCACTGTACCATCCATGAGGACGCGGATTAAGGTGCAAATGCAAGGTGTTGCTGTAGGTCGTGCCTTTGACTTGACCACGTTGAGTGGCTATGATGATCTCATAGATGAGCTTGAGAAATTGTTTGATATCAGAGGAGAGCTGCGTTCACAAAACAAATGGGCAGTTACTTTCACAGATGATGAAAATGACATGATGCTCGCGGGTGATGATCCATGGCTGGAGTTCTGCAACATAGTGAAGAGGATTTTCATTTGTTCAAGGGAGGACTTGAAAAAGATGAAATGCTGCAAGCTACCTGCATCTTCATCAGAGGTTGAAGAGACTCTGTTGAGCCCAGATTCACAGAATAGGGACGAGACTCAACAGTCTCAGATGGCTTAG 2163 0.4549 MAHLECNLRGPGSGSSQPEKGLKDDDLYRELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPSKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPANPDPSVSEAPKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTQATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMTRTMFLVYYKPRTSQFIVGLNKYLEAVNNKFLVGMRFKMRFEGDDSPERRFSGTIVGAGDVSPGWSNSQWRSLKVQWDEPATIPRPERVSCWEIEPFVASTALNVTQPAVKGKRSRPADVSSSGGRLVLTASGFWYHGSSHSHELTQLGAATAEVQSKENQVVACSLRQKDINSNNPINANNSSSSSRVRVEGVWSSPHLNVTSNLFSDPNNNNGTSALSSISTYPNVPSKSSDGPTCDRVEDGKKTENPLDCWLFGVNLSNNCSNVISPSSEREVRGPSSSIVPSGPKESIPAAACETERVQSPNYSLSNKGQKQIISEASPIEWQNKQATVPSMRTRIKVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFDIRGELRSQNKWAVTFTDDENDMMLAGDDPWLEFCNIVKRIFICSREDLKKMKCCKLPASSSEVEETLLSPDSQNRDETQQSQMA 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4407g00007 720 SMART B3_2 132 234 IPR003340 GO:0003677
Mupr4407g00007 720 MobiDBLite consensus disorder prediction 698 720 - -
Mupr4407g00007 720 Gene3D - 596 688 - -
Mupr4407g00007 720 ProSiteProfiles PB1 domain profile. 600 681 IPR000270 GO:0005515
Mupr4407g00007 720 MobiDBLite consensus disorder prediction 1 22 - -
Mupr4407g00007 720 Gene3D - 129 233 IPR015300 -
Mupr4407g00007 720 CDD B3_DNA 130 232 IPR003340 GO:0003677
Mupr4407g00007 720 MobiDBLite consensus disorder prediction 532 554 - -
Mupr4407g00007 720 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 26 688 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr4407g00007 720 SUPERFAMILY CAD & PB1 domains 595 676 - -
Mupr4407g00007 720 Pfam Auxin response factor 258 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr4407g00007 720 Pfam AUX/IAA family 597 682 IPR033389 -
Mupr4407g00007 720 Pfam B3 DNA binding domain 132 232 IPR003340 GO:0003677
Mupr4407g00007 720 FunFam Auxin response factor 293 364 - -
Mupr4407g00007 720 MobiDBLite consensus disorder prediction 693 720 - -
Mupr4407g00007 720 FunFam Auxin response factor 130 234 - -
Mupr4407g00007 720 SUPERFAMILY DNA-binding pseudobarrel domain 121 261 IPR015300 -
Mupr4407g00007 720 Gene3D - 293 365 - -
Mupr4407g00007 720 MobiDBLite consensus disorder prediction 469 497 - -
Mupr4407g00007 720 ProSiteProfiles B3 DNA-binding domain profile. 132 234 IPR003340 GO:0003677
Mupr4407g00007 720 MobiDBLite consensus disorder prediction 469 507 - -
Mupr4407g00007 720 MobiDBLite consensus disorder prediction 532 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4407g00007 Mupr-Chr4407 75454 79556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4407g00007 27 687 B3 DNA Binding Superfamily AT4G23980 55.271 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr4407g00007 AUX_IAA 1.4e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4407g00007 K14486 - gmx:100790981 1275.38