Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4400g00006 ATGGACGACTGTTGTGCCGTTTGCGCTGAGCCTTTGGAATGGGTTGCGTACGGCCCCTGTTCTCACCGGGAGGTGTGCTCCACGTGCGTCGCCCGCCTCCGTTTCATCTGCGACGATCGCCGTTGCTGCATCTGCAAGACCGAATGCAACGTCGTCTTCGTCACCAAGGCTCTTGGAGATTATACGAGGATGATTAATGACTTCTCGGCCCTTCCTTTGGAGGTAAGGGAGGGCAAGGTTGGATCATACTGGTACCACGAGGATACAAATGCATTTTTTGATGATGTGGACCATTACAAGATGATCAAGGCTATGTGCAGGCTTTCGTGCAGTGTGTGTGACAAGACAGAGGAGCAACCACAGGATGCTGCTTCAAGGCGGCGAGCAAAGTTCAGGAATATAGGGCAGCTGAAGGGTCATTTGTTCCACCGTCATAAGTTGCATATGTGCAGTTTGTGTTTGGAGGGAAGGAAGGCAGCATCCAGGGCAATCCACTTCCGTCAAGAGCACTTCTTGTGTGAAGATGAGGCTTGTCTTGCTAAGAAATTTGTTGTTTTTCAAGCTGAAGCAGAGATGAAGAGACATAATGCTATCGAACATGGAGGGCGGATGTCACGCTCTAAACGTAATGCTGCTCTTCAGGCATGTACACTGACAATCTTTTCTTTTGAACTCACTTCTCATATACCAACTAGCTTCCGTTACAGGCATGGTAATGAACATGAGCAACGCCGTGGAAGAGGTCGTACGTTTCGTCGTGATATTTCTGAAAATCAACTTTCTATGGCCATTGAAGCTAGTTTGGAAACAGCTAATGCAGAGCAAACATTTCGTGATCAATCAACATCAAGTAGTGGGCAAGTTGCTGTTGATGATGGGAATGCTGATATTGATTCTATCATTCATCCATTTGAATCATTAGCTACAGCAGGTTCTGAATCATCTTCAAGATACCTTCAAGCCTTGGGGCATAGCTCAAGGAGTGGACCTCTGGAAGATTCTTCCTTTCCACCGCTACCCATAGCTTCCAGCAATGGCCAGCAAAGGTCCAAACATGAAATGGAAGGTTCATCTAGTAACACTATGGCTGCACGTTTGCGTCGGCATGGCAACAGAAAAGTATCTGTTATTAATTCTGGCAATGCTTGGCCAGCAGCAGGTCGTGGACCGGTACAGTCATCAAGTAATCCTTCACAATCTAAACTGTCAACAAATAATGCTCTTGGAGTGTCTCATAATGCTGGGCAGATGAAGACAGTAATTAAAAGTGGACCTTCACCATCAACTTATGCTGGTTCTATCCAGGCTACACAAAGAACTGCTCATGGACAATTACCTACTGGTTCATTGAGGGACACGCGTGACAGTGGCAGAATTGTTCACTCTGCATCTGCTCCAAATCTCATGGAGAACAACTCCATTGAAGTTTCAATTTCTGATTTTCCTCCAGTTTCTGCTGCACAAGTGAGTAAGTTACCTGTGAGCAGCCAGTCCTCATTGAATGTGGAAAATGTTCAGTCTGCTAACAAGTCCTTGGTTGAAAAGATTCGTGGTGCTCTTGATTTTGATGAAGAAAGATATGCCATATTTAAAGACATTTCTGCCCAATATCGCCAAGGCACGATAGATACAGGTACATATCTGGATTATGTGCAGCAGTTTGGTTTGGCTCCTCTTGTGCCCGAGTTGGCAAGATTGTGCCCGGATATGCAGAAGCAGAAAGAGCTTGTTGAGGCTTACAATGCTAGTCTGCAAAGAATTGCTTTACCCGAAAATATCTTGGCTCGAGGCAGCACTAGCACCCATCGCAAAGACAATAATGTAAACAAGAAAGGTAAAGGTAAATCTGTAGATGGTAGGGGGAGTAACTCCACAGAGAAACTAGCAGATAGCTTTTTAAGCACTGTACATCAGCTTCAGGCAAGTTATAAACCTTCAGAAGAGAAGGTGGAGGTGCTATCAAGGGGTGATTACCGTAGTGACAGAGGAAAATTAAACATCGAGCATCGGATTGATACAAATTCTGTTAGTCAACCTATGGTGAAGCTTAGTGGGCGAACTGAAACATCAAATGGCAGTTTATCTAATCAAAATAGAGAGGATGGGGGTGGTGGTGGGAACAAGCAACGCAAGAAAGCTTCTAAGTTCCTGAGAGTGCGCCTTGGTGATGGTTCTGCGTCAGCCCTTCTTGATCAAACAGATCCTGGAACAACAGCCAGCTCAGAAGGTAACAGGGATGACTCTGGAGGAGGGCTGCCTGTGCGAGGTGTTTGGCGAAATGGGGGAGGTCATAGACTTTTTCCCTAA 2307 0.4577 MDDCCAVCAEPLEWVAYGPCSHREVCSTCVARLRFICDDRRCCICKTECNVVFVTKALGDYTRMINDFSALPLEVREGKVGSYWYHEDTNAFFDDVDHYKMIKAMCRLSCSVCDKTEEQPQDAASRRRAKFRNIGQLKGHLFHRHKLHMCSLCLEGRKAASRAIHFRQEHFLCEDEACLAKKFVVFQAEAEMKRHNAIEHGGRMSRSKRNAALQACTLTIFSFELTSHIPTSFRYRHGNEHEQRRGRGRTFRRDISENQLSMAIEASLETANAEQTFRDQSTSSSGQVAVDDGNADIDSIIHPFESLATAGSESSSRYLQALGHSSRSGPLEDSSFPPLPIASSNGQQRSKHEMEGSSSNTMAARLRRHGNRKVSVINSGNAWPAAGRGPVQSSSNPSQSKLSTNNALGVSHNAGQMKTVIKSGPSPSTYAGSIQATQRTAHGQLPTGSLRDTRDSGRIVHSASAPNLMENNSIEVSISDFPPVSAAQVSKLPVSSQSSLNVENVQSANKSLVEKIRGALDFDEERYAIFKDISAQYRQGTIDTGTYLDYVQQFGLAPLVPELARLCPDMQKQKELVEAYNASLQRIALPENILARGSTSTHRKDNNVNKKGKGKSVDGRGSNSTEKLADSFLSTVHQLQASYKPSEEKVEVLSRGDYRSDRGKLNIEHRIDTNSVSQPMVKLSGRTETSNGSLSNQNREDGGGGGNKQRKKASKFLRVRLGDGSASALLDQTDPGTTASSEGNRDDSGGGLPVRGVWRNGGGHRLFP 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4400g00006 768 PANTHER ZINC FINGER PROTEIN 598 164 666 IPR044288 GO:0061630|GO:0072344
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 380 404 - -
Mupr4400g00006 768 CDD RING-HC_ZNF598 3 53 IPR041888 -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 272 290 - -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 603 617 - -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 388 404 - -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 664 711 - -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 724 768 - -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 670 703 - -
Mupr4400g00006 768 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 272 291 - -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 595 625 - -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 323 362 - -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 438 457 - -
Mupr4400g00006 768 MobiDBLite consensus disorder prediction 730 745 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4400g00006 1 767 C2H2 Transcription Factor Family AT2G47090 34.719 1.89e-126 392