Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4396g00007 ATGGGGGAGGTGGTTATGAGCGGAGACAAGTCAGTGAGAGTGGAGAAGAAAGATAGTGGAACTGGAAGCAAGGGATTGATGAGGTGGGAGAAGTTCTTGCCAAAGATGATTCTGAGAGTGCTATTGGTTGAAGCCGATGATTCCACTAGGCAGATTATAGCCGCGCTTCTCAGAAAATGCAGCTACAAAGTGGCTGCTGTTCCTGATGGCTTGAAGGCATGGGAATTACTCAAGGGAAGACCACAAAATGTTGATCTAATACTGACAGAAGTGGATTTGCCTTCCATATCTGGCTATCCACTTCTCACATTAATTATGGAGCATGAGATTTGCAAGAACATCCCTGTCATAATGATGTCTTCACAAGATTCAATTAGCACAGTATACAAATGCATGCTGAGGGGTGCTGCTGATTATCTTGTTAAGCCCATTAGAAAAAATGAACTGAGGAATTTGTGGCAACATGTTTGGAGAAGACAATCATCAACCACTGGCATAAATGGTCCCCAAGATGAGAGTGTTGCACAGCAGAAGGTTGAAGCCACTGCTGAAAATAATGCTGCTAGTAATCGTTCAAGTGGTGATGCTGCTTGCATTCAGAGGAATATGGAATTAATTGAGAAAGAAAGTGATGCACAGACATTTGTGGCAAAGTACAAAGAACAACACAATCAAGTACATTTGAGCTCTTGTACAAAGCCTGACTTGGAAGATGAGAGTGGCCCTATTAATAACGTGCAGGAATTTTCTCCACTGAAATGTGGGGAAGCATATCCCAATGGAACAAAGACCCAAGAGGTTGAAACATGTATTCGTTTAGGCCAGACATTGATGATGCATGCCAGTCATGCTGGAGGATTAACTGTGGGTATCCTCAAAAATGGCGAGTCAAGCACAACTAATGACAAAGATGCTGATCCAGAGCACTTTGGGAATGCTAGCATCAGTGGTGAGGCTCATGACAATCACTATGTTCAAATCAACTCTTCCAAGGAAGCTATTGACTTGATTGGAACATTTCATACTCATCCAAACTGCACCCCAATGAATTCCACAGTTAATTGCACAGGCAAGTTTGAGTTTTCTCCTCAATTGGATCTTTCTCTGAGAAGATCTCGTCCCAGCAGTTTTGAGAATGAACTCACTGAAGAAAGGCACACCCTCATGCATTCTAATGCTTCAGCTTTCAAGCGGTATACTAACAGGCAATTGCAAGCCTCGACGCCTGCAGTGTTAATTAACTTATCTGATCAACAAAGAGAACAGAGAACAAATGGTGAGAAAAGCTTCTCACATATCGCCACTGGCTGCAACTCAGATAGTTCAACACCTAGTATGCAAAGAGGTATCATGTCTCCAACTACAGTCCAATCAAAAGAATCTGAACTTGCAACTTCTCACTCCCAGCAAGGGCATTCTCTCCCAATTCCAGTAAAGGGTGTAAGGTTCAATGATCTATGCACAGCCTATGGTTCTGTACTTCCTTCAGTGTTTCGTACACAATCAGGTCCACCAGCACCAAGTCCAAGTTCAGTCGTACTCCTTGAACCAAACTTTCAAGTAAATGCATTTTATCAGTCAAATACGAAAGAGTGTTCAGAGCAACTTTATGAACCTCGTGGTCCAAATGCAAACAACACCCAAAACTACATTGTGTACACACAGGAACACAAATCAGAACATGCAGAGGATCGAGGACATATCTCTCCTACAACTGATCAAAGTGTGTCAAGTAGTTTCTGTAATGGAAATGCAAGCCATCTTAACAGCATTGGTTATGGAAGCAACTGTGGAAGTTGCAGCAATGTTGATCAAGTTACCACTGTCAGGGCAACTTCAGAGGGTAAGAATGAAGACCTAACAAACAATGGAAACACTCATCGATCTATCCAAAGAGAAGCAGCTCTAAACAAGTTCCGCTTGAAAAGGAAAGAGAGATGCTATGAGAAGAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCCAGAGTGAAAGGACAATTTGTTCGTCAAGTGCATCCTGATCCTCTTGTAGAAAAAGATGGCAAAGAATATGATCACTCACAGATTTCTGACTCACTGGAGAGGAGAGCATGA 2106 0.425 MGEVVMSGDKSVRVEKKDSGTGSKGLMRWEKFLPKMILRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPQNVDLILTEVDLPSISGYPLLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVWRRQSSTTGINGPQDESVAQQKVEATAENNAASNRSSGDAACIQRNMELIEKESDAQTFVAKYKEQHNQVHLSSCTKPDLEDESGPINNVQEFSPLKCGEAYPNGTKTQEVETCIRLGQTLMMHASHAGGLTVGILKNGESSTTNDKDADPEHFGNASISGEAHDNHYVQINSSKEAIDLIGTFHTHPNCTPMNSTVNCTGKFEFSPQLDLSLRRSRPSSFENELTEERHTLMHSNASAFKRYTNRQLQASTPAVLINLSDQQREQRTNGEKSFSHIATGCNSDSSTPSMQRGIMSPTTVQSKESELATSHSQQGHSLPIPVKGVRFNDLCTAYGSVLPSVFRTQSGPPAPSPSSVVLLEPNFQVNAFYQSNTKECSEQLYEPRGPNANNTQNYIVYTQEHKSEHAEDRGHISPTTDQSVSSSFCNGNASHLNSIGYGSNCGSCSNVDQVTTVRATSEGKNEDLTNNGNTHRSIQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHPDPLVEKDGKEYDHSQISDSLERRA 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4396g00007 701 MobiDBLite consensus disorder prediction 161 194 - -
Mupr4396g00007 701 SMART REC_2 38 153 IPR001789 GO:0000160
Mupr4396g00007 701 MobiDBLite consensus disorder prediction 428 472 - -
Mupr4396g00007 701 PANTHER TWO-COMPONENT RESPONSE REGULATOR 39 309 IPR045279 GO:0009736
Mupr4396g00007 701 ProSiteProfiles Response regulatory domain profile. 39 157 IPR001789 GO:0000160
Mupr4396g00007 701 MobiDBLite consensus disorder prediction 658 701 - -
Mupr4396g00007 701 Pfam CCT motif 632 674 IPR010402 GO:0005515
Mupr4396g00007 701 MobiDBLite consensus disorder prediction 1 21 - -
Mupr4396g00007 701 Gene3D - 36 240 - -
Mupr4396g00007 701 MobiDBLite consensus disorder prediction 418 472 - -
Mupr4396g00007 701 Pfam Response regulator receiver domain 40 151 IPR001789 GO:0000160
Mupr4396g00007 701 CDD psREC_PRR 40 143 - -
Mupr4396g00007 701 SUPERFAMILY CheY-like 38 164 IPR011006 -
Mupr4396g00007 701 ProSiteProfiles CCT domain profile. 632 674 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4396g00007 Mupr-Chr4396 26220 30895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4396g00007 332 494 Response Regulator Gene Family AT5G24470 28.655 1.83e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mupr4396g00007 Response_reg 7e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4396g00007 K12130 - gmx:100777119 1150.58