Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4396g00002 ATGGTGTTGGCAATTGGTCTGTCCGCAAAGCGTTGGTGCTTCTGTTCTTCTACCGCCTTTTATCCATACCCACCGGCACTAAACCCTTCATCCTCCGTTCAACTCTTCCTTCATTCACCTTCAACCTTCCATCCTAAACTTGAAATCCAAGCTAAATTCTCCGTCCCTAAAACAGCACAACCATCCAACAAGGATTCCATTCTGCGGCGCCGCTGCAGTAACTCCCTGGCCACTACCGACGCCGAAACAGAAATTGGGATTAGCTTTGCGGAAACCCAACTGCTCTTGCTCAACAACCCTGACCTAACCTCCCTCTCAACGGACTCATTGCGCGCTCGTCTTCTCTCTCTACACTCTGTCGGCTTCGACCCTCTCACTCTCTGCAAATTAGTCACAAAGCGCCCAACCCTCCTAACAGCCAACGAAATCGACCCTTTCTTAACCTTTCTTAGAGACAAATTGCAAGGCCAGCTCCTGAAACAGCAACTGAAACGCCTCTTATCCGCTACGGAACCCAGACTCTTGCTCACTTTTCCTCAGAAGGTTCAATTTCTCGTTGACCGAGGACTTCCCGTTGACCATGTTATCCACGTGCTCAACAAACTGAATCTGCCAAGGGCCTTGTGTCATAGGTCGGTTGATGAGATTCACAGAACCATAGCTTTCTTAGAACCCTTTGGTGGCATTGCTTTGGTTCTGAAGTGCCCTCCAATTCTGAACCATGATTTGGATACTCAACTTATTCCTAGAGTCAAAGTTCTGATGGAGCTTGGTGATGGAGATAAGGATGGTGTTCGGAAACTGCTGCTTAGGTTTCCCATATTTTTGAATTACAGCGTGAAACATGTGGAGGGACATGTAGGGTTTCTTAGTTCTTTTGCTAAACTTGATGATAGACAGATATTTAGGATAATACTAGGATACCCGTCTATTGTTACTGCTAGCAGAGAGAGGAAACTGCGTCCTAGAATACAGTTTCTCAAGGAGTGTGGGTTGGATTCGGGTGACATCTTCAAGTTCTTGATCAAAGCGCCTACGTTTCTAAGCAATTCGTTCGACGAGAACATCGCGAAAAAGCTGGTGTTGCTGGTGAAGATTGGGTATAGATATAGGTCGAAGGAGTTGGCCATGGCAATTAGGTCTGCTACTAGGACAAACTGTGGGAACATGCAGAAGGTGATTGGTTTGTTCTTGAATTATGGGTTTTCATGTGAAGACATTGCTGCTATGAGCAAGAAGCAGCCGCAGATACTGCAGTACAATCACGCTTCTCTGGAGAAGAAGATGGAATACTTGATAGAGGAGATGGGCCGTGACATTGAGGAGTTACTGCTTTTTCCTGCATTTCTTGGTTACAAGTTTGATGATAGGATTAAGCATAGGTATGAAATAAAGAAGAGTGTTAGAGGCGGGGGAATGTCTATCAATAAGCTTTTAACTGTTTCTGATGAAAGATTCGCTGGCAAACGAAAAAAGGCCCTTGCCGTAGCTGAGTTTGAGTAA 1503 0.4551 MVLAIGLSAKRWCFCSSTAFYPYPPALNPSSSVQLFLHSPSTFHPKLEIQAKFSVPKTAQPSNKDSILRRRCSNSLATTDAETEIGISFAETQLLLLNNPDLTSLSTDSLRARLLSLHSVGFDPLTLCKLVTKRPTLLTANEIDPFLTFLRDKLQGQLLKQQLKRLLSATEPRLLLTFPQKVQFLVDRGLPVDHVIHVLNKLNLPRALCHRSVDEIHRTIAFLEPFGGIALVLKCPPILNHDLDTQLIPRVKVLMELGDGDKDGVRKLLLRFPIFLNYSVKHVEGHVGFLSSFAKLDDRQIFRIILGYPSIVTASRERKLRPRIQFLKECGLDSGDIFKFLIKAPTFLSNSFDENIAKKLVLLVKIGYRYRSKELAMAIRSATRTNCGNMQKVIGLFLNYGFSCEDIAAMSKKQPQILQYNHASLEKKMEYLIEEMGRDIEELLLFPAFLGYKFDDRIKHRYEIKKSVRGGGMSINKLLTVSDERFAGKRKKALAVAEFE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4396g00002 500 Pfam mTERF 297 389 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 Pfam mTERF 324 487 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 Pfam mTERF 84 365 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 SMART mt_12 408 439 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 SMART mt_12 440 472 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 SMART mt_12 302 333 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 SMART mt_12 338 369 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 SMART mt_12 93 123 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 SMART mt_12 128 157 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 SMART mt_12 229 260 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Mupr4396g00002 500 Gene3D Transcription termination factor 3, mitochondrial 73 262 IPR038538 -
Mupr4396g00002 500 Gene3D Transcription termination factor 3, mitochondrial 281 499 IPR038538 -
Mupr4396g00002 500 FunFam - 66 258 - -
Mupr4396g00002 500 PANTHER CGI-12 PROTEIN-RELATED 97 275 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mupr4396g00002 mTERF 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4396g00002 - - gmx:100799904 709.909