Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4393g00004 ATGATGGATCATGTTATTGCTGGGAAGTTTAAACTGGGGAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTTTATATAGCTGTTAATATACAAACTGGAGAGGAAGTGGCTGTCAAGCTGGAACCTGTGAAGACCAAGCATCCCCAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGAGTAGAGGGAGACTACAATGTCATGGCAATTGATCTTCTTGGACCAAGTTTGGAAGATTTGTTCAATTATTGCAACCGGAAGTTAACATTGAAGTCAGTGTTAATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCTAGAGGTTTCCTTCACCGTGACATTAAGCCAGACAATTTTTTAATGGGCCTAGGACGTAAAGCAAACCAGGTGTACATCATCGACTATGGCCTTGCAAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGCACAGCTCGTTATGCAAGTATCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTGAAGGCTGGCACCAAAAAACAAAAATATGATAAAATCAGTGAGAAGAAAATGTCAACTCCGATAGAGGGGCTCTGCAAATCATATCCTTCGGAGTTTATATCATATTTCCATTACTGCCAATCATTGCGGTTTGAAGACAAACCTGATTATTCATATTTGAAGAGACTTTTTCGAGAGTTATTTATTCGAGAAGGCTATCAATTTGACTATGTTTTTGATTGGACTATATTGAAGTATCCGCAGATTGGTGGCAGCTCTAGAGGGCGGCATGACAGTGGGAAGGCAGCTATGCCTGCAGGACCATCTGTACAAAAGCCAGAAAAGATATCAGTTGGGAAAGAGATTCGAGAAAAATTCTCTGGTGCTGTTGAAGCTTTCTCCCGGAGGAACCCAACAAGTTCTAGTCCCCGTGGTGATCACTCCAAACATAGGAGTTTTGAGGAAGTAGCAGTACACAAGGATGTGTGTCATGATCAAGAAAGGGGACGCAACTCCTCGCGATATGGCAGTGGTTCAAGAAGAGCCATAATCTCATCATCAACCCGGCCAAGTTCCTCCGGTGATCATACTGACAGTCGCACTGGCCGGCTAGCCTCAAGTGGTACTAGCCGTCCATCTACCACACACAGAAACATTCAACCTATGTATGAGACCAAACAACCATCTTACACTCGCTCTGGATCTACCAGAGGCAACCGCGAAGATTCTCAGCGTAGTTTTGAGCTCCTCTCTATCAGGAAGTAA 1395 0.4315 MMDHVIAGKFKLGRKIGSGSFGELYIAVNIQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMAIDLLGPSLEDLFNYCNRKLTLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMSTPIEGLCKSYPSEFISYFHYCQSLRFEDKPDYSYLKRLFRELFIREGYQFDYVFDWTILKYPQIGGSSRGRHDSGKAAMPAGPSVQKPEKISVGKEIREKFSGAVEAFSRRNPTSSSPRGDHSKHRSFEEVAVHKDVCHDQERGRNSSRYGSGSRRAIISSSTRPSSSGDHTDSRTGRLASSGTSRPSTTHRNIQPMYETKQPSYTRSGSTRGNREDSQRSFELLSIRK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4393g00004 464 SUPERFAMILY Protein kinase-like (PK-like) 5 291 IPR011009 -
Mupr4393g00004 464 ProSiteProfiles Protein kinase domain profile. 10 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4393g00004 464 MobiDBLite consensus disorder prediction 302 464 - -
Mupr4393g00004 464 MobiDBLite consensus disorder prediction 382 447 - -
Mupr4393g00004 464 MobiDBLite consensus disorder prediction 448 464 - -
Mupr4393g00004 464 Pfam Protein kinase domain 11 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4393g00004 464 MobiDBLite consensus disorder prediction 352 381 - -
Mupr4393g00004 464 FunFam Casein kinase 1-like protein 2 331 - -
Mupr4393g00004 464 PANTHER CASEIN KINASE-RELATED 9 401 - -
Mupr4393g00004 464 SMART serkin_6 10 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4393g00004 464 MobiDBLite consensus disorder prediction 326 340 - -
Mupr4393g00004 464 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Mupr4393g00004 464 CDD STKc_CK1_delta_epsilon 9 283 - -
Mupr4393g00004 464 FunFam Putative Casein kinase I 2 86 - -
Mupr4393g00004 464 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Mupr4393g00004 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4393g00004 Mupr-Chr4393 21211 26405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4393g00004 3 214 Miscellaneous Gene Families AT1G29230 26.484 2.67e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mupr4393g00004 Pkinase 5.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4393g00004 K08960 - gmx:100781494 848.58