Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4387g00007 ATGCTGAAATCAGGCATGAGAATTGAAGAGAGAAAGCAGGTGAGGAAGGTCGCGCAGGCGAGCTCGAGAAAGGGGTGTATGAGGGGCAAAGGAGGTCCTGAGAACGCGAGTTGCACCTACAAAGGTGTGAGGCAGAGAACTTGGGGCAAATGGGTCGCTGAAATCCGTGAACCCAATCGTGGTGCACGCCTCTGGCTTGGAACATTCGACACCTCCCATGATGCTGCCTTGGCCTATGATGCTGCAGCACGAAAGCTCTATGGATCTGATGCAAAACTCAACCTGCCAGAGCTTGTTGTTCCTGTGAATGTGAATGTGAATGCGAATTCTCAGCGTCCACCAAATCCTTCTCCCAACACTCAGATCCACCAAATGCAACAACAACAACCACAACCTCAGATTCACCAAACCTTTGATGTTACAACTGTCCCCTCTTCTGATCTCAACAACATCATGAACCCTGTGGTCTCCATGGCTTCTCAGCAGGCTGATGATGCACCAGTTTTCACCAACAACAACTCTATTGCCCCTCTTCCATTTGAAACCAACCCCGCTGCTCCAATGGAGAACTACTTCTCCAAACCCGTGGAGAACAACGAGGACAAGTTTCGCTCCTTTTGGGGGACTACCAACGATACTAACCCTATGTTTGATGAATCCATTTGGACTGAAGCTGCTATGTCTCTTGATTTTCCTATTATTGCAGATGATGGAATTTATGGAACTGGAAACCTGGGTGGTTGGGACTCCCAGCAAACTCCTTGGTGCATGTCTATCTTATAA 783 0.484 MLKSGMRIEERKQVRKVAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDAAARKLYGSDAKLNLPELVVPVNVNVNANSQRPPNPSPNTQIHQMQQQQPQPQIHQTFDVTTVPSSDLNNIMNPVVSMASQQADDAPVFTNNNSIAPLPFETNPAAPMENYFSKPVENNEDKFRSFWGTTNDTNPMFDESIWTEAAMSLDFPIIADDGIYGTGNLGGWDSQQTPWCMSIL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4387g00007 260 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Mupr4387g00007 260 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Mupr4387g00007 260 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Mupr4387g00007 260 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Mupr4387g00007 260 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Mupr4387g00007 260 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Mupr4387g00007 260 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Mupr4387g00007 260 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Mupr4387g00007 260 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Mupr4387g00007 260 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 12 183 - -
Mupr4387g00007 260 MobiDBLite consensus disorder prediction 107 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4387g00007 Mupr-Chr4387 63987 64970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4387g00007 6 97 AP2-EREBP Transcription Factor Family AT1G75490 82.609 3.84e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr4387g00007 AP2 8.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4387g00007 - - gmx:100790057 285.034