Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4387g00001 ATGTATCCTAACCAAGCCTTTTCTTCGGGGTCCTATGCGGAGATGTTGTCTGGGAATCCTCTTTTGCCTCATAACTACAGTGAATCTGTGGGAGGACAGAATGAGTTGAAGTTCATGACATCCATGGGAGACACAGTGACTATGCAGCCTATTGGTGGCCATTCCAATGCTTCTGCCGCTGGTGATTTTGCCAATGCTGGAGATTCCCATGTTATTCCAAGGACAACACAATTAGGACTTGTGGACAGTGAGCAAAATGTTCAGAACCAAGGCTTGTCTCTTAGCCTTGGGACGGTAATGCCTTCTATTGCATCTGTCCCTACCTTTCCATATCAGTATCCCGGCACCGGTTTTGCGTCACTAATGACTGCTTCTGTCCCAAATTTAAAGGGCACTTCGTCTCTTAAAGATGATGAGGCCAGCCTACAAAGGGAATTGAGAAATGCTGAGTGCATGGCATCTTTAGCTTCTGGAGGATTTCACAAAAGGGAGGGTCTGTATAATCAACACCCCTCAATGTGCCTCAGTGAAGGCCAAAGTGATGGATCACATGGTTTTTCCAACGGTGCCTTGAATTCACAATACCTCAAGGCAGCACAGGAGTTGCTTGATGAAATAGTTAATGTCCGAAAGGCATTGAAGCAAACTGGTTTGGAGAAGCAACAGAGTTTCCGTGACATCGGTTTAGATGGCTCCAAAGATTCTGATGGAAAATCTACCAGCCAATCCGTACAAATATCTTCAGGCCCCAATGGCTCTGCAGCAAACTCTTCATGTGAGCTATCACCTGCAGAACGACAGAATTTGTTGGACAAGAAGACAAAACTTTTGTCCATGTTGGATGAGGTAGATAAAAGATACCGCCAGTACTGCCATCAGATGCAGATTGTGGTGTCATCTTTTGATATGGTTGCTGGGTGTGGAGCAGCTGAACCATACACTGCACTTGCTTTGCGCACAATATCGCGCCACTTCCGGTGTTTGCGCGATGCCATTAGTGGCCAAATTCAAGTGACTCAAAGGAGCCTTGGAGAACAAGAGGGAATACCTCGTCTCCGCAATGTTGATCAGCAGCTTCGACAACAAAAGGCCCTTCAGCAACTTGGTGTTATGCGACAAGCATGGAGGCCTCAGAGAGGACTTCCTGAAACCTCTGTCTCAGTACTCCGTGCATGGCTCTTTGAGCATTTCCTTCATCCTTATCCTAAGGATTCAGAGAAAATTATGCTGGCAAGGCAAACTGGCTTAACAAGAAACCAGGTAGCAAATTGGTTCATTAATGCAAGGGTGCGTCTTTGGAAGCCAATGGTTGAAGAAATGTACAAAGAAGAATTTGGTGATTCAGAGATGAGCACCAATCTATTATCATCAGAGAGCACATTGAAAGGTCCAAGAGACGATGTTCAAGTTTCTGACAATAAAAGAGAAGAGTCTCAGGACAACATAGTAACACTTGATAGTGTTCAGCATCATGGGATGAAGTTGGATCATGCCTCAGAGTTGGACAGAGGGATCCAAAGTGGTGATCATGGAGAAAATGTCACGGATCCTAGAATTGGGAAATTGCAAGGTGACCAAAGGTTCAACATGAACAACAACAGTCCTTATTATGGTGATGGGTGCATAATGGCTTCTACTCCTGCCACGTATGATTTGTCAGAGTTGGGTAACATTGGCGTAGGCAGCCACGTGTCACTTGCATTGGAGTTGAGGAACTGCGAAAGCGACGGATTTGGCGCAGCAAATGATGACATGCATAAAAGACGCAAGAAGTCATTGGCTTCTTCCCCGGAAGCTGATTTGCTAGATTACCATTTCACAGACCAAGGAAAGCAACAAAACAAGTTTGGCAATCCTCATCTATTGCACGAGTTTGTTGTCTGA 1884 0.4528 MYPNQAFSSGSYAEMLSGNPLLPHNYSESVGGQNELKFMTSMGDTVTMQPIGGHSNASAAGDFANAGDSHVIPRTTQLGLVDSEQNVQNQGLSLSLGTVMPSIASVPTFPYQYPGTGFASLMTASVPNLKGTSSLKDDEASLQRELRNAECMASLASGGFHKREGLYNQHPSMCLSEGQSDGSHGFSNGALNSQYLKAAQELLDEIVNVRKALKQTGLEKQQSFRDIGLDGSKDSDGKSTSQSVQISSGPNGSAANSSCELSPAERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRNVDQQLRQQKALQQLGVMRQAWRPQRGLPETSVSVLRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMSTNLLSSESTLKGPRDDVQVSDNKREESQDNIVTLDSVQHHGMKLDHASELDRGIQSGDHGENVTDPRIGKLQGDQRFNMNNNSPYYGDGCIMASTPATYDLSELGNIGVGSHVSLALELRNCESDGFGAANDDMHKRRKKSLASSPEADLLDYHFTDQGKQQNKFGNPHLLHEFVV 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4387g00001 627 MobiDBLite consensus disorder prediction 449 464 - -
Mupr4387g00001 627 CDD homeodomain 375 436 IPR001356 GO:0003677
Mupr4387g00001 627 SUPERFAMILY Homeodomain-like 376 442 IPR009057 -
Mupr4387g00001 627 MobiDBLite consensus disorder prediction 224 262 - -
Mupr4387g00001 627 SMART prehox3 184 334 IPR006563 -
Mupr4387g00001 627 Pfam Homeobox KN domain 392 431 IPR008422 GO:0003677|GO:0006355
Mupr4387g00001 627 Coils Coil 196 216 - -
Mupr4387g00001 627 ProSiteProfiles 'Homeobox' domain profile. 372 435 IPR001356 GO:0003677
Mupr4387g00001 627 SMART HOX_1 375 439 IPR001356 GO:0003677
Mupr4387g00001 627 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 133 462 - -
Mupr4387g00001 627 Pfam Associated with HOX 191 333 IPR006563 -
Mupr4387g00001 627 MobiDBLite consensus disorder prediction 234 262 - -
Mupr4387g00001 627 Gene3D - 372 449 - -
Mupr4387g00001 627 MobiDBLite consensus disorder prediction 448 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4387g00001 Mupr-Chr4387 8090 11121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4387g00001 185 626 Homeobox Transcription Factor Family AT2G16400 46.341 1.65e-113 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mupr4387g00001 POX 1e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4387g00001 - - gmx:100775682 1099.73