Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr437g00002 GGTAGCTATGATGTGATTCCAGATCCTCTTGTTGCTTTCTCTGAACGATTCACCTTGGATTGGTCTATTAATTCAGCAGAAATTAAAAATTGTCCTACTTTGAAGGAAGATTTTGATGTGCTGGCTACTTTTGGTGCTGGAAAATTTTATATACCTTTGCCTTTTGGCATATTGACAGCCATGAGTAGCATGACAAATGGGGGTGATACTCGGAAAATATCCAAGGGTCGCCGGTCATCATCATTAGTTGAAGAAGCCAGTGGTGGAGATAACACAGGAGGAGAAGGTCCTCTAAAGAAAGGCCCATGGACTACAGCAGAGGATGCAATTTTGGTGGAATATGTCAAAAAGCACGGACAAGGCAATTGGAATGCAGTCCAAAAGCATTCAGGACTTGCCCGTTGTGGGAAAAGCTGCCGTCTACGATGGGCAAATCATTTAAGACCAGATCTGAAAAAAGGTGCATTCACTGAAGAAGAAGAGAAGCGAATTGTCGAGCTCCATGCTAAGATGGGAAACAAATGGGCTCGAATGGCTGCAGAGTTGCCTGGACGTACAGATAACGAGATCAAGAACTATTGGAACACAAGAATCAAAAGAATGCAACGATCTGGCTTACCAATTTACCCTGAAGAATTGTGCCAACGGATACTTAACGGCAATCAAGAAAGTCAAAATGTTGGCCCCGTGCCAAATGAAGCCTCCCAGCATGATGATTTCTCACAAACAGACAATTTTGATATACCAGATGTGGATTTCAACAGTTTCAAATTCCGTCATGGTCTATCAGATGGACTGTCGATTTTTGATATGCCTGAAAGCAACTTGTTTGAACAAAGTTCGGACTTATCCCATAGTTATAACATCTTGTTCCCACCAACGATGCATCCCCCGAAACGCCTGCGGGAGTCAGAAGTGCTATACAATAATAATTTTGGCAGTTGTACAAGTAATGCTTTCCCGCCTTTATTTGATCCCTATGGCAATTTTACCTGTGATCAAATTCCTGACGATCCTAGGTTGTCTCCTCCACGCGATCAAGTTCTTAACAGCAGTGACCAGTTTCATGGTGACAACCTTACCGGCAGCCATGCCGCATTAAATGGCAATGCCTCTTCTTCGGCGCCCATATCCGGGGCAATGAAGTTGGAGCTCCCTTCACTCCAATATCCTGAAACTCAACATGGTAGCTGGGGCACACCAATGTCCCCACTTCCTTCGCTTGAGTCCGTTGATACATTGATCCAGTCTCCTCTAGTTGAGCCTATTCTGTCAGATCCCATTTCTCCACAGACCAGTGGTTTGCTGGAAGCTATAGTCTTCAACTCAAAGAGCTTGAAAGGCTCAAGCAATGATTTATTATTGCAAGAGATGACCGGTACGGCGAACACGAACGAAGCAGTCAAGAATTCAACCTTGAATCCCTTCAAGTCAGAATGGGATGATGGGGAGCCAAGTTCCCCCTTAGGTCAATCTGCTCCTTCAGTTCTGACTGACTATACTCCTATAATCATGTGTCCAGTGGATGGCACCCAATCAATTAAAACCACTCAGGATCATGATGTTAAGCATGAAGCACTCACCCAGTTCCCAGATAGTTCTGGGAAGAAAGAAAATTCAAATCAGATAGAAATTACGTGGCCGGATGCTTTATTTGAAATAGGTTGGTTTGGGGGTAGCCCTGATCGTTCTGTTCTAAAAAATGCTTTAACTGCACTTATTGGTGAA 1728 0.4387 GSYDVIPDPLVAFSERFTLDWSINSAEIKNCPTLKEDFDVLATFGAGKFYIPLPFGILTAMSSMTNGGDTRKISKGRRSSSLVEEASGGDNTGGEGPLKKGPWTTAEDAILVEYVKKHGQGNWNAVQKHSGLARCGKSCRLRWANHLRPDLKKGAFTEEEEKRIVELHAKMGNKWARMAAELPGRTDNEIKNYWNTRIKRMQRSGLPIYPEELCQRILNGNQESQNVGPVPNEASQHDDFSQTDNFDIPDVDFNSFKFRHGLSDGLSIFDMPESNLFEQSSDLSHSYNILFPPTMHPPKRLRESEVLYNNNFGSCTSNAFPPLFDPYGNFTCDQIPDDPRLSPPRDQVLNSSDQFHGDNLTGSHAALNGNASSSAPISGAMKLELPSLQYPETQHGSWGTPMSPLPSLESVDTLIQSPLVEPILSDPISPQTSGLLEAIVFNSKSLKGSSNDLLLQEMTGTANTNEAVKNSTLNPFKSEWDDGEPSSPLGQSAPSVLTDYTPIIMCPVDGTQSIKTTQDHDVKHEALTQFPDSSGKKENSNQIEITWPDALFEIGWFGGSPDRSVLKNALTALIGE 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr437g00002 576 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 148 202 IPR017930 -
Mupr437g00002 576 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 147 IPR017930 -
Mupr437g00002 576 FunFam MYB-related transcription factor 99 152 - -
Mupr437g00002 576 CDD SANT 155 196 IPR001005 -
Mupr437g00002 576 Gene3D - 99 152 - -
Mupr437g00002 576 MobiDBLite consensus disorder prediction 67 102 - -
Mupr437g00002 576 FunFam Transcription factor MYB97 155 229 - -
Mupr437g00002 576 Gene3D - 155 229 - -
Mupr437g00002 576 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 83 532 - -
Mupr437g00002 576 CDD SANT 102 147 IPR001005 -
Mupr437g00002 576 ProSiteProfiles Myb-like domain profile. 95 147 IPR001005 -
Mupr437g00002 576 SUPERFAMILY Homeodomain-like 98 194 IPR009057 -
Mupr437g00002 576 MobiDBLite consensus disorder prediction 334 373 - -
Mupr437g00002 576 Pfam Myb-like DNA-binding domain 100 147 IPR001005 -
Mupr437g00002 576 Pfam Myb-like DNA-binding domain 153 196 IPR001005 -
Mupr437g00002 576 ProSiteProfiles Myb-like domain profile. 148 198 IPR001005 -
Mupr437g00002 576 MobiDBLite consensus disorder prediction 345 373 - -
Mupr437g00002 576 SMART sant 152 200 IPR001005 -
Mupr437g00002 576 SMART sant 99 149 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr437g00002 Mupr-Chr437 6464 12365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr437g00002 86 576 MYB Transcription Factor Family AT3G11440 39.499 1.46e-87 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr437g00002 Myb_DNA-binding 8.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr437g00002 K09422 - gmx:100800658 787.334