Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4377g00001 ATAATTGGAGCAAAGCAAGTTAAAAAAAAAGACAAGGAGGCAGAGTCAATGCGGGCCCGTAAACAACTAATTAATCAGGGTTTTTTCCGTGGACTGCAGCACTCGAAGCGTAATAAAATGGACATGTACATTCGTGTTAAACGTAGTAAGACAACATACTTCATCCGGTGCAAGCCATCTGATAAAATTCTTGACATAAAGCAGAAGTTGCAAGAATTAGTTGATCAGCCAGCTAATAATCAACGCTTAATTCTACCTGGTACTGGGGAAGTATTAGAAGACTCTAAGACTCTAGCAGATCAAAAGGTTGAAAATGATGCTGTTGTTGCACTGACCTTGAGAAAAGAGTCCTATTGCATGTTGCCTATGTTGTTCTTTGAAGGATCCTTCAATTTGGATGATAGAGATAGACTATTCAGTGGGGTGGATGAAATGGAGGAGGTGTGTAAGTGTTCTTTGCGACAAAAGGGTCCTCCAAAAATGTCCAAGGAACTTGGAGTCCTTATCCAAAACAATGATCTTGGGAAGACTATGCAACCTCATAACCTCCCTAAAGAAAAGATTGGTCACATTACATGCATCATCCATTTTATGACAAAGAATAAAATGGACTATCTAGGCAAACCTAGTACAAAGTCCATAGAGATATCAATTCAAAGAGTATTCGGAATAGGGAGAAGGGAAACACTCAAGTGTAGAATGCCGACTCGCTCTCAGCAAAGATTGATCCGATTCGGTCTCAGTAAAGACGAATCCGACATGGTCTCGGCTAAGTGCAGAGTTGGACACAATAGAAGTACAAACACAGGGTGTGAATTCAATGGGTTTCGCCTCCTACAACAATCGCCATGGAAGGACGGCGATGGTTCACCATCGATAGCCAAGACGTTGAGGATCAGGTCCACTAGAGTGTGTTGGCAAGCCAATCAGTCCCCTTTGACAACCTTCGGTCTCTCAGTTCCTGACCTGCACCTCCTCGATTGA 984 0.4248 IIGAKQVKKKDKEAESMRARKQLINQGFFRGLQHSKRNKMDMYIRVKRSKTTYFIRCKPSDKILDIKQKLQELVDQPANNQRLILPGTGEVLEDSKTLADQKVENDAVVALTLRKESYCMLPMLFFEGSFNLDDRDRLFSGVDEMEEVCKCSLRQKGPPKMSKELGVLIQNNDLGKTMQPHNLPKEKIGHITCIIHFMTKNKMDYLGKPSTKSIEISIQRVFGIGRRETLKCRMPTRSQQRLIRFGLSKDESDMVSAKCRVGHNRSTNTGCEFNGFRLLQQSPWKDGDGSPSIAKTLRIRSTRVCWQANQSPLTTFGLSVPDLHLLD 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4377g00001 327 PANTHER OS03G0364000 PROTEIN 32 135 - -
Mupr4377g00001 327 Pfam Ubiquitin family 44 115 IPR000626 GO:0005515
Mupr4377g00001 327 CDD Ubl_ubiquitin_like 44 111 - -
Mupr4377g00001 327 SUPERFAMILY Ubiquitin-like 40 117 IPR029071 -
Mupr4377g00001 327 SMART ubq_7 42 114 IPR000626 GO:0005515
Mupr4377g00001 327 ProSiteProfiles Ubiquitin domain profile. 40 118 IPR000626 GO:0005515
Mupr4377g00001 327 Gene3D - 40 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4377g00001 Mupr-Chr4377 721 6197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4377g00001 40 133 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 29.474 8.56e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4377g00001 K03873 - gmx:100499885 148.288