Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4354g00001 ATGGATCAAGAGAGAGGTGAGGTATTGGATCCGGTTCATGATGGGAATTTGAGTCATTTGGTTGAAGGAAATGCAGTTGCAAGAGCTAGTATAAGTGGAGAAGCTGGAACTTCAGGAGAGGTGGGTAAGGATTTTGGATCTGATAAGGAGGGGTTGAAGGAAGTTAAGGGTCTAGACAAGCATGATCAAGAAAATATCAGTTATAAATTACCTGGGGTTGAACAGGGAACTAGTTATAATTCAAACCATTTGGTTAATCAGGAAGTGATTGAAACTGTGGTTGTAATTGGGTCTGTTCAGAGTGAGTATGTCAATGAAGATAATGGGAAGTTGGAAGCAAAAGTTGATGAATCAGGGTTGAGCTTGGTGTCCATGAAAGCACCAAAAGAGGTGTCTGAAACTGAAGATAATTCATGTGTGATTGATATAATGTGCAGCAGCCACAAAAAGTTTTATGAGAATTCTGAAGGTGAAAGGATTTGTAGGATTTGTCATCTGACTTCTGGGCAACCGTTGGATGAAACGGCTGCTGGAACTGCTAATAGTGCTATAAGTGCAGATTTGATTCAGCTTGGTTGTGCGTGTAAAGATGAGCTAGGCATTGCACACGTTCATTGCGCTGAGGCGTGGTTCAGGCTTAAGGGGAACAGGTTGTGTGAAATATGCGGCGAGGCTGCAAAAAATGTTTCAGGTATTACTAGTAATGGATTTATGGAAGAGTGGAATGAAACAAGATTCATGGACAACGATGGTAACTCGTCCCGCAGGGTTGTTGGATGCTGGCGAGGACAGCCATTTTGTAACTTCTTGATGGCATGCCTG 822 0.4246 MDQERGEVLDPVHDGNLSHLVEGNAVARASISGEAGTSGEVGKDFGSDKEGLKEVKGLDKHDQENISYKLPGVEQGTSYNSNHLVNQEVIETVVVIGSVQSEYVNEDNGKLEAKVDESGLSLVSMKAPKEVSETEDNSCVIDIMCSSHKKFYENSEGERICRICHLTSGQPLDETAAGTANSAISADLIQLGCACKDELGIAHVHCAEAWFRLKGNRLCEICGEAAKNVSGITSNGFMEEWNETRFMDNDGNSSRRVVGCWRGQPFCNFLMACL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4354g00001 274 ProSiteProfiles Zinc finger RING-CH-type profile. 153 229 IPR011016 GO:0008270
Mupr4354g00001 274 PANTHER ZINC FINGER, RING-CH-TYPE 25 274 - -
Mupr4354g00001 274 Pfam RING-variant domain 161 222 IPR011016 GO:0008270
Mupr4354g00001 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 234 IPR013083 -
Mupr4354g00001 274 SMART ringv_2 160 223 IPR011016 GO:0008270
Mupr4354g00001 274 SUPERFAMILY RING/U-box 155 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4354g00001 Mupr-Chr4354 2424 3917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4354g00001 141 274 C3H Transcription Factor Family AT5G05830 40.288 5.39e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4354g00001 - - gmx:100776373 453.366