Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr4348g00003 | ATGACGGGTCTGGACCCCGAGTACAACAGGTTGTTCAACGAGGGCATGGTGTGTACGGCCAGGGTCGTCAGCAAGGCTGTCATTAATGGCTACAAAGATGGCTTCAACAAGATTAAGTCCTTGGTCGATGTGGGAGGTGGCATCGGTGGTTCTCTCTCCGAGATTGTCAGAGCCTACCCCCACATCAAGGCCATTAACTTTGACTTACCTCATGTCGTCGCCACCGCGCCTATGTATGATGGAATCACCCACGTTGGAGGTGACATGTTCGTCTCTATTCCCAGTGCTGATGCTATTTACATGAAGTGGATTCTGCACGACTGGAGCGACGAGCACTGCGTGAAGATATTGAAGAACTGCAGGAAGGCAATATCGGAGAAGACAGGAAAGGTGATAATTGTGGATTATGTGCTGCGGCCCGAAGGGAACGAGCTGTTCACTGACGTTGGCATTGCATTTGACATGATGCTTCTTGCTCACAACGCTGGTGGCAAAGAGAGGACTGAAGAGAACTGGAAGTGGCTATTCAAAGAAACTGGATTCGCGCGTTACAACATCATCAAGATCAACGCTCTCCCCTCCATCATTGAGGCTTTTCCAATCTGA | 606 | 0.4983 | MTGLDPEYNRLFNEGMVCTARVVSKAVINGYKDGFNKIKSLVDVGGGIGGSLSEIVRAYPHIKAINFDLPHVVATAPMYDGITHVGGDMFVSIPSADAIYMKWILHDWSDEHCVKILKNCRKAISEKTGKVIIVDYVLRPEGNELFTDVGIAFDMMLLAHNAGGKERTEENWKWLFKETGFARYNIIKINALPSIIEAFPI | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr4348g00003 | 201 | CDD | AdoMet_MTases | 41 | 138 | - | - | |
| Mupr4348g00003 | 201 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 200 | IPR016461 | GO:0008168 | |
| Mupr4348g00003 | 201 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 4 | 198 | IPR029063 | - | |
| Mupr4348g00003 | 201 | FunFam | O-methyltransferase family protein | 1 | 199 | - | - | |
| Mupr4348g00003 | 201 | PANTHER | O-METHYLTRANSFERASE | 5 | 183 | IPR016461 | GO:0008168 | |
| Mupr4348g00003 | 201 | Pfam | O-methyltransferase domain | 4 | 182 | IPR001077 | GO:0008171 | |
| Mupr4348g00003 | 201 | Gene3D | Vaccinia Virus protein VP39 | 1 | 201 | IPR029063 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr4348g00003 | Mupr-Chr4348 | 29926 | 30630 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr4348g00003 | 3 | 187 | Monolignol Biosynthesis Gene Families | AT5G54160 | 52.406 | 1.64e-63 | 199 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr4348g00003 | K22588 | - | gmx:100800801 | 401.364 |