Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4342g00004 CACGGTGAGAAGAAGTGGAAGTGTGATAAGTGCTCCAAGAAATATGCTGTTCAATCAGATTGGAAAGCTCACTCCAAAACCTGTGGCACCAGAGAGTATAGATGTGACTGTGGCACCCTCTTCTCCAGAAGGGACAGTTTCATCACCCACAGGGCGTTTTGTGATGCTTTGGCACAGGAAAGTGCAAGAGAGGCACCAAACTTGAGCAGTGGAATTGGCAATAACCAACTATATGGAAACAGTGACAACATGTCCTTAGCCTTATCTCAGAATATGGGTCCACAACAAATCCATGACCAATCTAGTGACCTATTGCGTTTTGGCGGTGCAAGGAGTGGTCAATTTGACCACATTCTCCCACCAACCCTTGCCTCACCCTTCAGACCCTCCTCACACCAAACCCCTCCATTCTTCATGCCAGACTCAAACCTAAACCAAAACTACCATGAGCACCAACAAGGGCTAATCTCAAACAAACCATTCCAAGGACTAATACAATTGTCTGAACTCAACAACAACAACAATAACACCCCTTCTGCCTCCAACCTCTTCAACCTTCCCTTTCTATCCTCCAACCGAGGCAACAACAATGATGAACACCAACACTTCAACAGCACTGAAGGCTCCAATTTCTTCTCAGAAAGTGCCCTAAACATTGGCACCGACCACCAAACAAGCTCCACCACTGCCCCTTCTCTCTTCAGCACTTCCCTTCAAAACAGTACCAACAACCTTTGTCACATGTCCGCAACCGCACTGCTTCAAAAAGCTGCTCAAATGGGCGCTGCAAGTTCAAGTAACAACAACAACAACAGTGCCTCCTCGTTGCTCAGAACCTTAGCATCCAAAAATGAGCATCATCATCATCATCATAGGCCACTCACTGCTGCAAACTACGGAACCATCTTCCACAACAGTGTTCAAGACATGATCAACATCCCAGCATTTGATGCATACGATCATCATGGCATCAACAAAGAGCCAAAACTCAGCGTTGGAGGCTCTGATAGGCTCACCAGGGACTTTCTTGGTGTTGGTGGCCAGAATCAGATAGTGAGAAACATGAGTGGTGCTAGTAGTGGACGATTTTCACACCAACAACAACGTGGCTTTAACTTAAGCTCTTTGGAAGCAGACACAAACAATAATGCTGCGCCGTCAGCTCAATCTTTCGGGGCTGGAGGGAACTTTCAGTGA 1197 0.4662 HGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAREAPNLSSGIGNNQLYGNSDNMSLALSQNMGPQQIHDQSSDLLRFGGARSGQFDHILPPTLASPFRPSSHQTPPFFMPDSNLNQNYHEHQQGLISNKPFQGLIQLSELNNNNNNTPSASNLFNLPFLSSNRGNNNDEHQHFNSTEGSNFFSESALNIGTDHQTSSTTAPSLFSTSLQNSTNNLCHMSATALLQKAAQMGAASSSNNNNNSASSLLRTLASKNEHHHHHHRPLTAANYGTIFHNSVQDMINIPAFDAYDHHGINKEPKLSVGGSDRLTRDFLGVGGQNQIVRNMSGASSGRFSHQQQRGFNLSSLEADTNNNAAPSAQSFGAGGNFQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4342g00004 398 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 361 IPR031140 -
Mupr4342g00004 398 Gene3D Classic Zinc Finger 1 68 - -
Mupr4342g00004 398 MobiDBLite consensus disorder prediction 377 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4342g00004 Mupr-Chr4342 24216 28426 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4342g00004 1 358 IDZ Gene Family AT2G02070 39.529 6.13e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4342g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4342g00004 K25870 - gmx:100818072 471.47