Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4321g00001 ATGAAGAGAGGCAGAGAAGAGGGTGTGGCTAATTGTTTGATGCTATTGACCAAAGTAGGTGAGAGTGAAACCAACCCATCAAAGGATAGAGAGTTAAGGAATATTGGCGATTTCAAGTGCAAATCTTGCAATAGAAGGTTCTCTTCTTTTCAAGCCCTTGGTGGGCACAGAGCAAGTCACAAGAAGCCGAAGCTCATGGTTACAGATCTTTCGTGCCATCACGTGCAGTTACCGAGCCCAACTAGGATGCACCCGTGTCCGATTTGTGGGCTTGAGTTTGCTATTGGACAAGCTTTGGGAGGGCACATGAGGAAGCATAGAAGTGCTATTAATAATGGTTTAGAAAATTGTCGTAGAGATTCATTGTCCATCTTGAAGAAATCGAAAGATGCTGCTGAAAGGTTGAATTTGTGCTTCGACTTGAACTTGACGCCGTTGGAGAATGATGATCTTAAGCTCAACCTAAGAACGCCCGTCCTGAATTGTTTCATTTGA 495 0.4384 MKRGREEGVANCLMLLTKVGESETNPSKDRELRNIGDFKCKSCNRRFSSFQALGGHRASHKKPKLMVTDLSCHHVQLPSPTRMHPCPICGLEFAIGQALGGHMRKHRSAINNGLENCRRDSLSILKKSKDAAERLNLCFDLNLTPLENDDLKLNLRTPVLNCFI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4321g00001 164 SMART c2h2final6 38 60 IPR013087 -
Mupr4321g00001 164 SMART c2h2final6 84 106 IPR013087 -
Mupr4321g00001 164 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Mupr4321g00001 164 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Mupr4321g00001 164 SUPERFAMILY beta-beta-alpha zinc fingers 38 106 IPR036236 -
Mupr4321g00001 164 PANTHER ZINC FINGER PROTEIN ZAT5 5 149 - -
Mupr4321g00001 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Mupr4321g00001 164 Pfam C2H2-type zinc finger 38 63 - -
Mupr4321g00001 164 Pfam C2H2-type zinc finger 84 108 - -
Mupr4321g00001 164 Gene3D Classic Zinc Finger 35 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4321g00001 Mupr-Chr4321 8229 8723 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4321g00001 1 155 C2H2 Transcription Factor Family AT2G28710 46.386 1.33e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4321g00001 zf-C2H2_6 1.7e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4321g00001 - - gmx:100781211 248.44