Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4320g00002 ATGGTGCTGGAGCACGAAGTGAAAGAAGCTGGATTATATGTTGATGATATAAAAGCGAGTTTCCACAGTACTACAACAACAACAACAATCGCTCTCTTTACCCTTCTCATTCCTTCTCTCTCCGCCTTGCATTTCCCTAGTTCGAAAATGCCGATGTTTCAGCCCTGTAGGAGGGACATGGTTGCGGGGTTCGAGGGCGGCGGCGATGGGCAGATTCTAGATCTGGACGCGGCCGTGAAGGGCGGGGTTTTGGGCGGGGTGGAGGGCGGCGTAGTGGTGGGTGAGAAGTTGGATCTGGGGAAGATGATTGAGGAGCTGGAGCTATGCGAAGTGCCTAGCGTGTTCATTTGCCCAATCTCTTTGGAAGCAATGCAGGACCCTGTGACGCTTTGCACGGGGCAAACCTATGAGAGGTCCAACATTCTTAAATGGTTCAACCTTGGGCACTTCACCTGCCCCACCACCATGCAGGAGCTCTGGGACGATTCCATCACCCCAAACACCACCCTTTACAGACTCATTCACACCTGGTTCTCCCAGAAGTACTTGCTCATGAAGAAGAGGTCAGAGGATGTTCAGGGACGGGCTTCTGAACTTCTCGACACCCTCAAGAAGGTCAAGGGCCAGGCCCGTGTTCAGGCCCTCAAGGAGCTTCACCTTTTAGTTTCTTCTCATTCCACTGCACGCAAGACTGTCATTCACCAAGGTGGAGTGTCTGTTGTGTCTTCTTTGCTTGGTCCTTTTACTTCACATGCTGTTGGCTCTGAGGTTATTGGTATTCTTGTTACTTTGACCCTTGATTCGGAATCTAGGAAGAATCTCTTGCAGCCTGCCAAGGTTTCCTTGATGGTTGATATCTTGAATGAGGGTTCCATTGAGACCAAAATCAATTGCACGCGCCTTATTGAATCCTTGATCGAGGAGAAGGATCTTCGATCGGAGGTTATCTCGAGTCACAGCCTCTTGGTTGGGTTGATGAGGCTTGTTAAGGATAAGAGACACAGCAATGGAGTGTGTCCTGGGCTGAGCCTTCTCAGGACAATATGTTTGCACAAGGAAGTCAGAAATTTGCTTGTCAGCATTGGGGCTGTTTCTCAGTTGGTTGAATTGTTGTCTGGTATGGAGCCTGATTGTTTGGAATTGGCCCTTTGTGTTTTGGATTCCTTGGCGTCTATACCCGAAGGAAGAGTGGCTTTGAAGGATTGTTCTAACACCATACCCATTATGGTCAAACTGTTGATGAGGATCTCAGAAAACTGCACTCAGTATGCTCTGTCATTTCTATGGTCTGTGTGCAAACTTGCCCAGGACGAGTGCTCCTCTATTGTTGTTGATGCAGGGTTTGCTGCAAAACTCCTACTTGTGGTTCAAAGTGGTTGCAATCCCTTATTGAAACAACAGTCTGCTGAGCTTTTAAAGCTGTGTAGTTTAAATTATTCGGGTACCATCTTCATTTCCAAGTGCAAGCTTACCAGAACCATCCAATGA 1488 0.4812 MVLEHEVKEAGLYVDDIKASFHSTTTTTTIALFTLLIPSLSALHFPSSKMPMFQPCRRDMVAGFEGGGDGQILDLDAAVKGGVLGGVEGGVVVGEKLDLGKMIEELELCEVPSVFICPISLEAMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSITPNTTLYRLIHTWFSQKYLLMKKRSEDVQGRASELLDTLKKVKGQARVQALKELHLLVSSHSTARKTVIHQGGVSVVSSLLGPFTSHAVGSEVIGILVTLTLDSESRKNLLQPAKVSLMVDILNEGSIETKINCTRLIESLIEEKDLRSEVISSHSLLVGLMRLVKDKRHSNGVCPGLSLLRTICLHKEVRNLLVSIGAVSQLVELLSGMEPDCLELALCVLDSLASIPEGRVALKDCSNTIPIMVKLLMRISENCTQYALSFLWSVCKLAQDECSSIVVDAGFAAKLLLVVQSGCNPLLKQQSAELLKLCSLNYSGTIFISKCKLTRTIQ 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4320g00002 495 ProSiteProfiles U-box domain profile. 110 184 IPR003613 GO:0004842|GO:0016567
Mupr4320g00002 495 SMART Ubox_2 114 177 IPR003613 GO:0004842|GO:0016567
Mupr4320g00002 495 SUPERFAMILY ARM repeat 207 479 IPR016024 -
Mupr4320g00002 495 PANTHER WDSAM1 PROTEIN 104 481 IPR045185 GO:0061630
Mupr4320g00002 495 CDD RING-Ubox_PUB 112 162 IPR045210 -
Mupr4320g00002 495 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 183 IPR013083 -
Mupr4320g00002 495 Gene3D - 184 487 IPR011989 -
Mupr4320g00002 495 Pfam U-box domain 111 181 IPR003613 GO:0004842|GO:0016567
Mupr4320g00002 495 SUPERFAMILY RING/U-box 105 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4320g00002 Mupr-Chr4320 20816 22543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4320g00002 50 495 U-box Gene Family AT3G49810 72.991 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4320g00002 - - gmx:100816457 803.897