LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4315g00001	ATGAAACCAGCAGCGGTTGCACGTCAATTCAGTTACCTAATTTCCAACAAAAGCATTTTGGAGAATCTCATGAATGAACTCAAGAATCTGCAAGACCAAAGTCAAAAGGTGCAAGAAAATCTTACTTGGGATTCTGAAGATTACCAAACTCAAAGTAGCTGGTTAAACAAAGTCGATGAGATTGCTGGACAAGTGAATGGATTCTTGAACTACTATGAAGGCAAAGGTACTTGCACAAATTTCTTGTGGCGATACAAGGTTGGTAAACAATCAAGAAAGATGAAAGTAGATATTTCAAAATTACATGAAGATGGACAATCTTATCTATCTGCAAAACCAGCAAAAGATTACAAGGGCCCAAAATCAAGAGCTGATACCATGCATGATATTATGGAAGCCCTAATGGACACTCTAATCCAAACAATTGGAGTATGGGGGTTGGGTGGTGTAGGCATAACCACACTAGCCAAACAAGTTGGGGAGCAAGCAAAAGAAGAAAAGTTGTTTGATGTAGTGGTTTTCATCACAATAACTGAGAAGCCAAAGGTGGAAAAAGTTCAAGAAGATATTGCAGCTGAATTAGGTGTGCAGTTCAATGAGGAAACACTTATGAAAAGAAGAAACAAACTGCGTCAGAGAATAAAGAAGGAGAAACAAATTCTTGTCATAGTTGATGATAAGTGGGGAGAATTGAACCCTCAAGAATTTGACTTGGAGGAATTTGGAGTTCCTTTGGGTGATGAACATGCAGGGTGCAAATTATTGTTGACATCAGGAAATTTGAATTTCATACAAAATTTGAAGGGTGCCCCTAAGCCTAAGGTGTTTCAATTAGAAGTATTAAAAGAAGACGAGGCTCAGAGCTTGTTTGAGAAGATGGTTGGAGGTGTAGCTGAAGATCCCGAGGCAAGTTCCATTGTGATCGAAATAGTGAAAAGTTGTGAAGGTTCAATCTCTTCAATTTTTGCCATAGCAAAGGCATTAGAAAATAAGGGTCGAGATGCCTTGGTGCAGTTGAAGGAAAATGTTTCACCAATAAAACTATTGTCCAATAGTTTAGAAGATGAAGAACTCAAATCATTGTTGTTGCTTCTTACTATTCGGGGAAGAAGGGCTATTAACAAGTATAGCATATACACAGACATGTGGACAGGTTTATTCAAAAATCTTGAAACATTAGATGCTGCAAGAAATAGGCGTGATTCATTGATTAATGATCTTAAGGCCTATGGTCTTCTGGTTGAAGATGAAAAGGAAAGTGTTAAGATAGATGACTTCATATGGCAAACTGCTTATTCAATAGCTCAAAATGATCTAAAAGCTTTAATGATTTCTAAGGAATTGCCTCCTGAAGATTGGCTAAGAGGTTTATGCTTTTGCAACATAAATGAAGTGAGTGGTTTGCAGGTTCCTGAAAGATTGCAATGTCCAAACTTGCAACAGCTTGTGATGAGTACAATCAGTCCCTCAACTCACGTTCCACATTCCTTTTTTGAGGAGACTAAACTTCTGAAAGTCCTAAACTTTGTTGGCTTTGATTGTTCAAAGCTTCCAAATAGTTTTGTTTCGTTAAAGAACCTTGAAGCATTATCCATGCATAAATGCAAATTGGGAGATATTACTGAAGTTGGGGAGCTCACAAACTTACGAGTGCTTGAGCTTATTGGAAGTAGTATCAAACAATTGCCTGCACAAATTGGAAAGCTTCAGAAGTTGTTGTTGTTGGATTTAAGAGATACATATCTCCAAGTGATTCCACCCCATATTCTGTCCAACCTGACAAGCTTAGAAGAGTTATATTTGAGAAACTCCTTTTTTAATTGGGAGATTGAAATATCTACCAATGCAAACAACAATGCAAGCTTGAAAGAGCTTACAAACTTGGATCACTTGACATATATAGAAGACTTGTATGTTCCTGATCCTCAAGCATGGCCAGTGGAGTTGTTCTTTGGAAAACTAAAATCATATACAATTTTCATTGGGGATAGTTGGGACCGAAAGCATGATGGTGATCATGGATTGAAGACATTGAAGTTGAAGCTCAAAAGAAGGTTTCAACCGGAGGATGGGATAAAGAAGATGTTGGAAAGTGTTGATGTTTTATATTTGGATGAACTGAATGGTGTCCAAAATGTTCTTAATGATTTGGATTGTGATGGGTTTCCCCATTTGCAATCTCTGGTTATACAACACAATGCTGAAATCAAATGCATAGCCACAAGGTTAAGTCATGATCCTTTTGATGCTTTCCCCAATTTGGAGTCTTTGTTTCTCAACAATCTAAGCAATTTGGAGCACATATGCCATGGTCCTTTAATTGAAAAGTCTTTCTTCACACTAAGAGTCATCAAAGTACAGAAGTGTGATGCAATGGGAAGTCTCTTCTCAAATTCAATGGTCAATAGCCTTCCTCATCTGGCCAATATGGAAGTTTCAGAGTGCAAATCCATGAAGACAATTGTGCTTATGGAAGGTGAAGAGAATCCTCTCATGGAATTTCCTGAGTTATGCTCTCTAACCTTACGAGCACTCCCAAAATTAATTAGTTTCTGCTCAAGTGAACGAACATCTTTCATTGATACACCTACATTTTTTCATGACAAGGTTTCTTGTCCTAATATGGAGACTATGATGATTTCTCAGGTTAGTGAAATGATAACACTATGGAATGAAGCGTATGATGTTCCAAATTCGTTTTGGAAACTAAAAAACGTAAACATCACACATTGTGAGAAATTGAGGACTATTTTTCCTGTTAATCTTTCTAAAAATCTTCATAATTTGAAGATATTAGAGGTTAGAAATTGCAATTCAATGACAAGCATTTTTACTGTGATGAGGCAAGATAACAAACAACCGGGACTTCAATTGAGCATTCCAATGATTAGTATAAATTTAGTTGAACTGCCAAAATTGGAGTATGTATGTGTAACTACTGGATTTGAATCCCTGAAGAGAAAATTTGAGGAAGAATGGCATTCTTATTTTCCACGCAGGGAACGTGTTGAAAGCGAAAAAAGGATGAAAAAGTTTTTGGAAGAACATTTAAATATGTAG	3060	0.3693	MKPAAVARQFSYLISNKSILENLMNELKNLQDQSQKVQENLTWDSEDYQTQSSWLNKVDEIAGQVNGFLNYYEGKGTCTNFLWRYKVGKQSRKMKVDISKLHEDGQSYLSAKPAKDYKGPKSRADTMHDIMEALMDTLIQTIGVWGLGGVGITTLAKQVGEQAKEEKLFDVVVFITITEKPKVEKVQEDIAAELGVQFNEETLMKRRNKLRQRIKKEKQILVIVDDKWGELNPQEFDLEEFGVPLGDEHAGCKLLLTSGNLNFIQNLKGAPKPKVFQLEVLKEDEAQSLFEKMVGGVAEDPEASSIVIEIVKSCEGSISSIFAIAKALENKGRDALVQLKENVSPIKLLSNSLEDEELKSLLLLLTIRGRRAINKYSIYTDMWTGLFKNLETLDAARNRRDSLINDLKAYGLLVEDEKESVKIDDFIWQTAYSIAQNDLKALMISKELPPEDWLRGLCFCNINEVSGLQVPERLQCPNLQQLVMSTISPSTHVPHSFFEETKLLKVLNFVGFDCSKLPNSFVSLKNLEALSMHKCKLGDITEVGELTNLRVLELIGSSIKQLPAQIGKLQKLLLLDLRDTYLQVIPPHILSNLTSLEELYLRNSFFNWEIEISTNANNNASLKELTNLDHLTYIEDLYVPDPQAWPVELFFGKLKSYTIFIGDSWDRKHDGDHGLKTLKLKLKRRFQPEDGIKKMLESVDVLYLDELNGVQNVLNDLDCDGFPHLQSLVIQHNAEIKCIATRLSHDPFDAFPNLESLFLNNLSNLEHICHGPLIEKSFFTLRVIKVQKCDAMGSLFSNSMVNSLPHLANMEVSECKSMKTIVLMEGEENPLMEFPELCSLTLRALPKLISFCSSERTSFIDTPTFFHDKVSCPNMETMMISQVSEMITLWNEAYDVPNSFWKLKNVNITHCEKLRTIFPVNLSKNLHNLKILEVRNCNSMTSIFTVMRQDNKQPGLQLSIPMISINLVELPKLEYVCVTTGFESLKRKFEEEWHSYFPRRERVESEKRMKKFLEEHLNM	1019

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4315g00001	1019	PRINTS	Disease resistance protein signature	924	940	-	-
	Mupr4315g00001	1019	PRINTS	Disease resistance protein signature	141	156	-	-
	Mupr4315g00001	1019	PRINTS	Disease resistance protein signature	214	228	-	-
	Mupr4315g00001	1019	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	851	991	-	-
	Mupr4315g00001	1019	Coils	Coil	200	220	-	-
	Mupr4315g00001	1019	Pfam	Leucine rich repeat	547	603	IPR001611	GO:0005515
	Mupr4315g00001	1019	Gene3D	Ribonuclease Inhibitor	333	635	IPR032675	-
	Mupr4315g00001	1019	Gene3D	-	109	272	IPR027417	-
	Mupr4315g00001	1019	Coils	Coil	13	40	-	-
	Mupr4315g00001	1019	Gene3D	Ribonuclease Inhibitor	673	979	IPR032675	-
	Mupr4315g00001	1019	SUPERFAMILY	L domain-like	454	822	-	-
	Mupr4315g00001	1019	Pfam	NB-ARC domain	125	344	IPR002182	GO:0043531
	Mupr4315g00001	1019	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	121	343	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4315g00001	Mupr-Chr4315	2842	6379	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4315g00001	519	638	Trihelix Transcription Factor Family	AT1G12040	31.707	1.01e-06	50.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4315g00001	-		-	aprc:113854183	1132.86