LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4310g00001	ATGAATTCAACTTCTCATGCTTTCCCTTTACCGTCGTCGCTATTGCCAAGGGACGCATCACCCGAGTGGAACAACAAAGCAGACAACGCATGGCAACTGACCGCGGCAACGCTAGTGGGCCTTCAGAGCGTTCCCGGGCTGGTGATACTGTACGGCAGCATGGTTAAGAGAAAATGGGCCGTGAATTCGGCCTTCATGGCCCTATACGCCTTCCCCGCTGTGCTCATCTGTTGGGTCTCGTGGGCCCACGGCATGGCGTTCGGCACCAGGCTCTTGCCATTCGTGGGAAAGCCCAACCACGCTCTGACTGACAAGTTTCTCCTTGCAAAGTCAACGGTTGGGTATTTTCCAATGGCTGACTTTGTGTTCTACCAATTCGCTTTTGCTGCAATCACTGTTGTGTTGCTTGCAGGGTCTTTGCTTGGGCGAATGAATTTCTATGCGTGGATGCTGTTTGTACCGTTGTGGCTTACCCTGTCTTACACCATTGGTGCCTTCACCATATGGGGCCATGATGGCTTCCTTCAGGACAAAATAATTGATTATGCTGGTGGATTTGTCATTCATTTATCTTCCGGTGTTGCCGGTTTCACAGCTGCTTATTGGGTTGGTCCAAGAATTTCGCATGACCGACAAAACTTTCCACCAAATAACATAATTCACATGCTTGGAGGTGCAGGGTTTTTGTGGATGGGTTGGACAGGTTTTAATGGAGGAGCTCCGTTCCAAGTGGGAAAAACCGCATCCTTGGCCATCTTCAATACCCATCTATGCACTGCCACAAGCCTACTCGTTTGGATTTTACTCGACATGATTGTGTATACCAAGAGCTCTCTTATAGGTGCTGTCCAGGGTATGATCACTGGCCTCGTCTGCATCACACCAGGTGCAGGCTTGGTGGATTCATGGGCAGCAATATTGATGGGAGCTTTGTCCGGTTCCATTCCATGGTACACCATGATGGTGTTGCATCGAAAATCCGCGTTCTTTCAAAGTGTAGACGATACATTAGGAGTCTTTCACACTCATGCTGTGGCTGGTCTTCTTGGGGGCCTTCTTTCTGGCGTGTTTGCCAAGCCCACCCTTCTAAGACTAATGTATCCCGATTCGCATAACTGCCCCGGCTTGTTTTATAGCTTTTTTGAGAGGAAAGTGAGTCATGGCTTTAAGCAAATATGGTACCAATTACTTGGAGCAGGTTTTGTTGTTGTTTGGAATGTCCTTGTTACTAGCCTCATCTGTATTCTTATAAGCCGCATTATGGATCTTAGGATGCAGGAAGAGGACCTTGAGATTGGTGATGATGCTGCTCATGGGGAAGAAGCGTACGCGTTGTGGGGTGATGGAGAGAGAATGAGGGTCCCTCTTCGTCTTCATATAACTCCAACAATTCCTTCACTTTGTCGCCGAAGGTCTTCAATTCCTGTCACCGTTAAAGAAGAAGAAGAATAG	1452	0.4821	MNSTSHAFPLPSSLLPRDASPEWNNKADNAWQLTAATLVGLQSVPGLVILYGSMVKRKWAVNSAFMALYAFPAVLICWVSWAHGMAFGTRLLPFVGKPNHALTDKFLLAKSTVGYFPMADFVFYQFAFAAITVVLLAGSLLGRMNFYAWMLFVPLWLTLSYTIGAFTIWGHDGFLQDKIIDYAGGFVIHLSSGVAGFTAAYWVGPRISHDRQNFPPNNIIHMLGGAGFLWMGWTGFNGGAPFQVGKTASLAIFNTHLCTATSLLVWILLDMIVYTKSSLIGAVQGMITGLVCITPGAGLVDSWAAILMGALSGSIPWYTMMVLHRKSAFFQSVDDTLGVFHTHAVAGLLGGLLSGVFAKPTLLRLMYPDSHNCPGLFYSFFERKVSHGFKQIWYQLLGAGFVVVWNVLVTSLICILISRIMDLRMQEEDLEIGDDAAHGEEAYALWGDGERMRVPLRLHITPTIPSLCRRRSSIPVTVKEEEE	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4310g00001	483	Pfam	Ammonium Transporter Family	30	443	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Mupr4310g00001	483	FunFam	Ammonium transporter	13	446	-	-
	Mupr4310g00001	483	PRINTS	Rhesus blood group protein signature	220	238	IPR002229	GO:0005886
	Mupr4310g00001	483	PRINTS	Rhesus blood group protein signature	125	141	IPR002229	GO:0005886
	Mupr4310g00001	483	PRINTS	Rhesus blood group protein signature	251	273	IPR002229	GO:0005886
	Mupr4310g00001	483	PRINTS	Rhesus blood group protein signature	344	360	IPR002229	GO:0005886
	Mupr4310g00001	483	Gene3D	Ammonium transporter AmtB like domains	15	446	IPR029020	-
	Mupr4310g00001	483	NCBIfam	ammonium transporter	28	443	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Mupr4310g00001	483	SUPERFAMILY	Ammonium transporter	23	425	-	-
	Mupr4310g00001	483	ProSitePatterns	Ammonium transporters signature.	181	206	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Mupr4310g00001	483	PANTHER	AMMONIUM TRANSPORTER MEP2	13	452	IPR001905	GO:0008519\|GO:0016020\|GO:0072488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4310g00001	Mupr-Chr4310	1307	3100	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4310g00001	118	451	Inorganic Solute Cotransporters	AT2G38290	60.180	3.81e-137	397

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4310g00001	K03320		-	gmx:100815876	875.544