Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4308g00003 ATGTCTCTGCGACGTCGCTCTTGTTCCGAGACGAGGAAGAAATCCTTTAAGACTGGAATTGACGCGGAACGGAGTCGGATAAGGAGGGAAGAGGACCTCATTGGGATCAGAAAGAGCAAACGTGAAGACACTCTTCGCAAGAAACGAAGACAAACTCGCAATGACGAGTTTGAAGTTATTCCAAATATGGTACAACGCCTATTGTCTGGATACCCTGCCGCACAATTGCAAGTTCGCATTACAAAAGATTGCCGGCGCCTATCAATTGATGAAATCATTAAGGCAGGTGTGGTACCTCGCTGTGTGGAGTTCTTGACAAGGTATGATGCACCCCAATTGCAGCTTGACGCTGTATGGGTTTTAAGCAATCTTGCTTCCGGAGCATCCCAACACGCAACACTTGTCGTTGAACTTGGTGCTGTTCCCTCCTTGCTCAATCTTCTCACCTCTAGCACCACCGATTATATCAAAGAACTGGCAGTATCAGCTTTAGGGAACATTGCCGGTGATTCCCTAAGTTATAGGGATCTTGTTCTCAAACACGATGCTCTCAGGCCATTATTATATCTGTTGAATTCAAATTCAGGGTTGTCTTTGTTAAGGGCTGCTACATGGAGTTTATCTAATTTGGTCCGTGGAATCCCTCCGCTAAATTCTGAACAGGTAAAGGCTTCCTTGACTGCCCTTGGGCGACTCATCTACTCGACCGACGAAGAAGTTGTGACAGATGCATGCTGGGCTCTCTCTTACCTTTCGGACGGCTCAATAGTTGACAAAATTCAAGCTGTTATTGAAGCAGGAGTTTGCCCAAGACTTGTGGAGCTTCTGCTGCATCCATCAGACACAGTTATTGTACCTGCGCTTCTGACTCTGGGAAATATTCTTTGTGGTGACGATGCTCAGACTCAGTTTGTAATCGATAACCGATTGCTTCCGAATCTTCTACGACTTCTTACGCATGAACACAAAAAAAGCATCTATAAAAAAGCTTGTTGGACAATCTCAAATATCACAGCTGGGAATAGAGCTCAAATACAGGCTATCATCGACGCCAATTTTATTCCTCCTCTGGTTAATATTCTTCAACATGCTGAGTTTAGCATCAAGAAGGAGGCTGTCTGGGCCATCATCAATATCACTTATGGAGGAACTTATGAGCAGATCAGGTTGGTGGTGACTCAAGGTTGCATTAAGTCACTATGTGATCTCTTGACCTGTCCAGACCCACAGGTTGTGGCAATTTGTCTGGAGGGGCTGGAAAACATTTTGGAGGTACGAAAAGAAGCTGACAAGAAAATGGGAGTGCAGGGTAGAGTCAATGCTTTTGCTCAAATGGTTGATGAATGTGGAGGATCGGATAAGATTGCAAATTTGCAGACCCATACCAACAATGATATTCATAATACAGCTGTAATGTCTCTGCCACCTGGCTCTTCTTTCGAGACGAGGAAGAAAACTTATAAGAGTGGAATTGATTCTGACCAGAGTCGGAGAAGGAGGGAGGACGACCTTGTGGGCATCAGAAAGAACAAACGCCAAGACACTCTCTTCAAGAAACGAACACAAACTCATTTTACCCCTATCGATGATGTGCTTGAGGCTGTACGGGTTTTAGCCAATGTTACTTCCGGAACATCCGAACAGGTAAGACTTGTCGTTCAACTTGGTGCTGTTCCTTGCTTCGTCAATCTTCTCAGCTTTAGTACCACCGATGGTGTCGGAGAAGAGGTAGCATGGGCTTTAGGGAACATTGCCGCTGATTCCCCAAGCAATAGGGATCTTGTTCTTAACCATGCTGCTCTCTGGCCGTTATTATATAAGTTGAATTCAAGTTTAGAATTGTCTATGTTGAGGGTTGCTACTTGGAGTTTATCTAATATGGTCCGTGGAAACCCTCCTTTAAATTTTGATCAGGTAAATGTTGCCTTGACTACCCTTGGACGACTCATCCAGTTGAACGATGAAGAAGTTGTAACAGATGCATGCTGGGCCCTCTCTTACCTTTCGGATGACTCATTTAACAAAATTCAAGCTATTATTGAAATAGGAATTTGCCCTAAACTTGTGTCGCTTCTGCTCCATCCTTCAGATACAGTTATTGTACCTGCGCTTCGGACTCTAGGAAATATTGTTTGTGGTGATGATGCTCAGACTCAGGCTGTAATTGATAACCTATTGCTCCCGTGTCTTCACCAACTTATTACGAATCAACACAAAATAACCATCTTTAAAGAAGCTTGTTGGACAATCTCAAATATCACAGCTGGGAATAGAGCTCAAATACAGGCTGTCATTGACGCCAATATTATTCCTCCTCTGGTTCATATTCTTCATTGTTCTGAGTTTCACATTAAGAAGGAGGCTATCTGGGCCATCATCAATATCATTCATGGAGGATCCCATGATCAGATCAGGTTAGTGGCGACTGAAGGTTGCATAAAGCCACTATGCGATCTCTTGAGCTGTCCAGACCCACAGGTTGTGATCATTTGTCTAGAGGGGCTGGGAAAAATTTTGGAGCTGGGAAAAGCTGACATGGATATGGGAGTGCAGGGTAGAGTCAATATTTTTGCTCAAATGGTTGATCAATGTGGAGGATCTGATAAGATTGCAAATTTGCTCATCCATGACAACCGTGATATATATAATAAGGCCTTTTGGATTTTTCAGAGATTTTGGGCTCAAGATCTGAATCAGCAAGATGCTTCTTTTGGGGTTAACTATCCTCACCTCCCCCCAGGCCCAGGCGGTTTCAACTTTGGATCATAG 2769 0.4388 MSLRRRSCSETRKKSFKTGIDAERSRIRREEDLIGIRKSKREDTLRKKRRQTRNDEFEVIPNMVQRLLSGYPAAQLQVRITKDCRRLSIDEIIKAGVVPRCVEFLTRYDAPQLQLDAVWVLSNLASGASQHATLVVELGAVPSLLNLLTSSTTDYIKELAVSALGNIAGDSLSYRDLVLKHDALRPLLYLLNSNSGLSLLRAATWSLSNLVRGIPPLNSEQVKASLTALGRLIYSTDEEVVTDACWALSYLSDGSIVDKIQAVIEAGVCPRLVELLLHPSDTVIVPALLTLGNILCGDDAQTQFVIDNRLLPNLLRLLTHEHKKSIYKKACWTISNITAGNRAQIQAIIDANFIPPLVNILQHAEFSIKKEAVWAIINITYGGTYEQIRLVVTQGCIKSLCDLLTCPDPQVVAICLEGLENILEVRKEADKKMGVQGRVNAFAQMVDECGGSDKIANLQTHTNNDIHNTAVMSLPPGSSFETRKKTYKSGIDSDQSRRRREDDLVGIRKNKRQDTLFKKRTQTHFTPIDDVLEAVRVLANVTSGTSEQVRLVVQLGAVPCFVNLLSFSTTDGVGEEVAWALGNIAADSPSNRDLVLNHAALWPLLYKLNSSLELSMLRVATWSLSNMVRGNPPLNFDQVNVALTTLGRLIQLNDEEVVTDACWALSYLSDDSFNKIQAIIEIGICPKLVSLLLHPSDTVIVPALRTLGNIVCGDDAQTQAVIDNLLLPCLHQLITNQHKITIFKEACWTISNITAGNRAQIQAVIDANIIPPLVHILHCSEFHIKKEAIWAIINIIHGGSHDQIRLVATEGCIKPLCDLLSCPDPQVVIICLEGLGKILELGKADMDMGVQGRVNIFAQMVDQCGGSDKIANLLIHDNRDIYNKAFWIFQRFWAQDLNQQDASFGVNYPHLPPGPGGFNFGS 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4308g00003 922 MobiDBLite consensus disorder prediction 469 501 - -
Mupr4308g00003 922 MobiDBLite consensus disorder prediction 469 484 - -
Mupr4308g00003 922 MobiDBLite consensus disorder prediction 1 20 - -
Mupr4308g00003 922 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 139 168 IPR000225 GO:0005515
Mupr4308g00003 922 SUPERFAMILY ARM repeat 17 471 IPR016024 -
Mupr4308g00003 922 Pfam Importin beta binding domain 483 524 IPR002652 GO:0006606|GO:0061608
Mupr4308g00003 922 Pfam Importin beta binding domain 12 76 IPR002652 GO:0006606|GO:0061608
Mupr4308g00003 922 SMART arm_5 128 169 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 671 712 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 588 629 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 85 126 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 714 755 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 545 586 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 341 381 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 631 670 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 298 339 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 170 212 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 800 840 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 215 253 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 384 424 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 256 296 IPR000225 GO:0005515
Mupr4308g00003 922 SMART arm_5 757 797 IPR000225 GO:0005515
Mupr4308g00003 922 ProSiteProfiles IBB domain profile. 1 58 IPR002652 GO:0006606|GO:0061608
Mupr4308g00003 922 PANTHER IMPORTIN ALPHA 12 471 - -
Mupr4308g00003 922 Pfam Atypical Arm repeat 440 471 IPR032413 -
Mupr4308g00003 922 Pfam Atypical Arm repeat 855 896 IPR032413 -
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 226 252 IPR000225 GO:0005515
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 676 710 IPR000225 GO:0005515
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 133 168 IPR000225 GO:0005515
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 175 212 IPR000225 GO:0005515
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 758 795 IPR000225 GO:0005515
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 386 422 IPR000225 GO:0005515
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 545 586 IPR000225 GO:0005515
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 342 380 IPR000225 GO:0005515
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 89 126 IPR000225 GO:0005515
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 259 294 IPR000225 GO:0005515
Mupr4308g00003 922 Pfam Armadillo/beta-catenin-like repeat 801 835 IPR000225 GO:0005515
Mupr4308g00003 922 FunFam Importin subunit alpha 522 894 - -
Mupr4308g00003 922 SUPERFAMILY ARM repeat 483 896 IPR016024 -
Mupr4308g00003 922 ProSiteProfiles IBB domain profile. 467 529 IPR002652 GO:0006606|GO:0061608
Mupr4308g00003 922 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 182 210 IPR000225 GO:0005515
Mupr4308g00003 922 Gene3D - 482 521 IPR036975 GO:0006606
Mupr4308g00003 922 Gene3D - 11 51 IPR036975 GO:0006606
Mupr4308g00003 922 FunFam Importin subunit alpha 58 474 - -
Mupr4308g00003 922 Gene3D - 59 474 IPR011989 -
Mupr4308g00003 922 Gene3D - 522 894 IPR011989 -
Mupr4308g00003 922 MobiDBLite consensus disorder prediction 485 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4308g00003 Mupr-Chr4308 24878 36969 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4308g00003 263 380 U-box Gene Family AT5G42340 29.412 8.28e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4308g00003 K15042 - aew:130779640 553.903